RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 TRIM49BA6NDI0 452 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 RTCAO00442 366 aaKnown RBP3.62□□□□□ -1.83
CCDC7-208ENST00000537047 HAT1O14929 419 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 NDST2P52849 883 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
CCDC7-208ENST00000537047 SIX1Q15475 284 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-208ENST00000537047 ATAD3CQ5T2N8 411 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 AGAP7PQ5VUJ5 663 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 FAM180BQ6P0A1 224 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 TMEM64Q6YI46 380 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 SLC24A5Q71RS6 500 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 NDUFAF2Q8N183 169 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 C17orf53Q8N3J3 647 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-208ENST00000537047 C4orf32Q8N8J7 132 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 AGAP11Q8TF27 550 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 MGME1Q9BQP7 344 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 PANK2Q9BZ23 570 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 PRMT7Q9NVM4 692 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-208ENST00000537047 NAALAD2Q9Y3Q0 740 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 IGSF1Q8N6C5 1336 aa3.62□□□□□ -1.83
CCDC7-208ENST00000537047 A0A1W2PPQ1 181 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 ARHGEF33A8MVX0 844 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 SH3BGRLO75368 114 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 LY6G6DO95868 133 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 CHRNA3P32297 505 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 NAP1L1P55209 391 aaKnown RBP3.61□□□□□ -1.83
CCDC7-208ENST00000537047 ITPK1Q13572 414 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 PCLAFQ15004 111 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 DUSP28Q4G0W2 176 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 KHDRBS2Q5VWX1 349 aaKnown RBP3.61□□□□□ -1.83
CCDC7-208ENST00000537047 SZRD1Q7Z422 152 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 CATSPER3Q86XQ3 398 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 LRTM2Q8N967 370 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 METTL21AQ8WXB1 218 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 FAM120BQ96EK7 910 aaKnown RBP3.61□□□□□ -1.83
CCDC7-208ENST00000537047 B3GALT6Q96L58 329 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 TEX13BQ9BXU2 312 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 SLC2A11Q9BYW1 496 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 SYNCQ9H7C4 482 aa3.61□□□□□ -1.83
CCDC7-208ENST00000537047 ELF5Q9UKW6 265 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-208ENST00000537047 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
CCDC7-208ENST00000537047 FAM168BA1KXE4 195 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 CASTOR2A6NHX0 329 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 C2CD4DB7Z1M9 353 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 TRAFD1O14545 582 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-208ENST00000537047 DOK2O60496 412 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 ZBED4O75132 1171 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 BAIAP3O94812 1187 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 VENTXO95231 258 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 PAX3P23760 479 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 MATR3P43243 847 aaKnown RBP eCLIP3.6□□□□□ -1.83
CCDC7-208ENST00000537047 MC1RQ01726 317 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 RUNX3Q13761 415 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 KIAA0141Q14154 515 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-208ENST00000537047 PLEKHS1Q5SXH7 462 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 C9orf66Q5T8R8 295 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 PRR27Q6MZM9 219 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 C4orf50Q6ZRC1 276 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 GPC2Q8N158 579 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 TCEANCQ8N8B7 351 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 TDRD5Q8NAT2 981 aaKnown RBP3.6□□□□□ -1.83
CCDC7-208ENST00000537047 MCUQ8NE86 351 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 OR10S1Q8NGN2 331 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 KLHL5Q96PQ7 755 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 IL1RAPQ9NPH3 570 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 CRNNQ9UBG3 495 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-208ENST00000537047 ITIH6Q6UXX5 1313 aa3.6□□□□□ -1.83
CCDC7-208ENST00000537047 A0A1W2PPM1 405 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 SLC1A7O00341 560 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 AADACP22760 399 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 EDNRAP25101 427 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 LMO2P25791 158 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 GSK3BP49841 420 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 ALDH3A2P51648 485 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 CCR3P51677 355 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 HSPB3Q12988 150 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 ZNF79Q15937 498 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 Q1RN00 199 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 CFAP61Q8NHU2 1237 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 SEPHS2Q99611 448 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 HACD3Q9P035 362 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 RPS6KL1Q9Y6S9 549 aa3.59□□□□□ -1.83
CCDC7-208ENST00000537047 ZNF749O43361 778 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 RAB40ALP0C0E4 278 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 PFKFB1P16118 471 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 OR1D5P58170 312 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 CREB5Q02930 508 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 RASGEF1BQ0VAM2 473 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 SNAPC1Q16533 368 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 OR4D10Q8NGI6 311 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 ROBO4Q8WZ75 1007 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 BADQ92934 168 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 ZNF622Q969S3 477 aaKnown RBP eCLIP3.58□□□□□ -1.84
CCDC7-208ENST00000537047 SKA1Q96BD8 255 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 PRRG4Q9BZD6 226 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 STK26Q9P289 416 aa3.58□□□□□ -1.84
CCDC7-208ENST00000537047 E9PAM4 449 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms