RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 EFTUD2Q15029 972 aaKnown RBP eCLIP13.58□□□□□ -0.242e-6■■■□□ 17.4
UBE3B-206ENST00000536398 SYT16Q17RD7 645 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 WHAMMP3Q1A5X7 153 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 MUM1Q2TAK8 710 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 KBTBD12Q3ZCT8 623 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 VWA2Q5GFL6 755 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 CATSPEREQ5SY80 951 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 CAPN13Q6MZZ7 669 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 C8orf74Q6P047 294 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 LCTLQ6UWM7 567 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 CYS1Q717R9 158 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 MED25Q71SY5 747 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 LAPTM4BQ86VI4 370 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 NKAPQ8N5F7 415 aaKnown RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 FBF1Q8TES7 1133 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 NUDT9Q9BW91 350 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 PCBD2Q9H0N5 130 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 EPN3Q9H201 632 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 WDR54Q9H977 334 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 GPAMQ9HCL2 828 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 MLXIPLQ9NP71 852 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 NSMCE4AQ9NXX6 385 aa13.58□□□□□ -0.24
UBE3B-206ENST00000536398 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
UBE3B-206ENST00000536398 GCN1Q92616 2671 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 PEX12O00623 359 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 SOCS6O14544 535 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 CD63P08962 238 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 ENO2P09104 434 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 GSTA2P09210 222 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 FBLP22087 321 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 EMP3P54852 163 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 MAT1AQ00266 395 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 POU4F1Q01851 419 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 USP10Q14694 798 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 TSNQ15631 228 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 DCAF10Q5QP82 559 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 PRSS41Q7RTY9 318 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 C17orf64Q86WR6 236 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 CTAGE3PQ8IX95 158 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 PPM1NQ8N819 430 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 AMER3Q8N944 861 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 TMEM102Q8N9M5 508 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 ZNF740Q8NDX6 193 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 STT3BQ8TCJ2 826 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 CDKL2Q92772 493 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 MMABQ96EY8 250 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 TSNARE1Q96NA8 513 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 GPR22Q99680 433 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 RBBP8Q99708 897 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 CPNE1Q99829 537 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 YIPF2Q9BWQ6 316 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 SPNS1Q9H2V7 528 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 DMGDHQ9UI17 866 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 NOVA2Q9UNW9 492 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 HS3ST3B1Q9Y662 390 aa13.57□□□□□ -0.24
UBE3B-206ENST00000536398 MDC1Q14676 2089 aaKnown RBP13.57□□□□□ -0.24
UBE3B-206ENST00000536398 HELZ2Q9BYK8 2649 aaKnown RBP13.56□□□□□ -0.24
UBE3B-206ENST00000536398 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 ZGLP1P0C6A0 271 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 MMP11P24347 488 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 CCND1P24385 295 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 HRH2P25021 359 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 GP5P40197 560 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 SLC26A3P40879 764 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 PGDP52209 483 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 SLC12A2P55011 1212 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
UBE3B-206ENST00000536398 TLE1Q04724 770 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 KLC1Q07866 573 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 KLRB1Q12918 225 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 NADK2Q4G0N4 442 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 KIRREL2Q6UWL6 708 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 CTAGE6Q86UF2 777 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 MMGT1Q8N4V1 131 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 AMER2Q8N7J2 671 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 KCT2Q8NC54 265 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 ABHD11Q8NFV4 315 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 OR4K1Q8NGD4 311 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 OR9A4Q8NGU2 314 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 NEIL2Q969S2 332 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 MIEF2Q96C03 454 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 TM4SF19Q96DZ7 209 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 MOCOSQ96EN8 888 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 PHACTR1Q9C0D0 580 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 POPDC3Q9HBV1 291 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 CTNNAL1Q9UBT7 734 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 ZNF282Q9UDV7 671 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-206ENST00000536398 ANAPC2Q9UJX6 822 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 FBXL4Q9UKA2 621 aa13.56□□□□□ -0.24
UBE3B-206ENST00000536398 PCDHGA9Q9Y5G4 932 aaKnown RBP13.56□□□□□ -0.24
UBE3B-206ENST00000536398 IGLV3-12A0A075B6K2 115 aa13.55□□□□□ -0.24
UBE3B-206ENST00000536398 PABPN1LA6NDY0 278 aaKnown RBP13.55□□□□□ -0.24
UBE3B-206ENST00000536398 NCF1BA6NI72 391 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-206ENST00000536398 NCF1CA8MVU1 366 aaPredicted RBP13.55□□□□□ -0.24
UBE3B-206ENST00000536398 AGPSO00116 658 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms