RNA–Protein interactions for RNA: ENST00000536187.6

CACNB3-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-202ENST00000536187 C19orf60Q96EN9 201 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 CCDC3Q9BQI4 270 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 EHD1Q9H4M9 534 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 FAM60AQ9NP50 221 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 TMEM9BQ9NQ34 198 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 CCL27Q9Y4X3 112 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 CFAP54Q96N23 3096 aa17.18■□□□□ 0.34
CACNB3-202ENST00000536187 NDUFAB1O14561 156 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 HGSO14964 777 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-202ENST00000536187 UGDHO60701 494 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 TROVE2P10155 538 aaKnown RBP eCLIP17.17■□□□□ 0.34
CACNB3-202ENST00000536187 PCNAP12004 261 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 CMPK1P30085 196 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 BCL6P41182 706 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 GRK6P43250 576 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 CCR8P51685 355 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 EPHA4P54764 986 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 CYP4F2P78329 520 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 CCL7P80098 99 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 CYP4F3Q08477 520 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 XKR7Q5GH72 579 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 TMEM198Q66K66 360 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 ALYREFQ86V81 257 aaKnown RBP17.17■□□□□ 0.34
CACNB3-202ENST00000536187 PAQR7Q86WK9 346 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 HUS1BQ8NHY5 278 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 IFI44Q8TCB0 444 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 RHBDD1Q8TEB9 315 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 ACPTQ9BZG2 426 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 NSRP1Q9H0G5 558 aaKnown RBP17.17■□□□□ 0.34
CACNB3-202ENST00000536187 MEAF6Q9HAF1 191 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 PELI2Q9HAT8 420 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 PCDHGB2Q9Y5G2 931 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 GVINP1Q7Z2Y8 2422 aa17.17■□□□□ 0.34
CACNB3-202ENST00000536187 COL5A1P20908 1838 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 H0YIV9 168 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SNUPNO95149 360 aaKnown RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 INHBCP55103 352 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 TERF2Q15554 542 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 FRG2Q64ET8 278 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 ZNF574Q6ZN55 896 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SLC45A3Q96JT2 553 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 CNDP2Q96KP4 475 aaKnown RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 FRG2BQ96QU4 278 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 AICDAQ9GZX7 198 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 STK38LQ9Y2H1 464 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 ENTPD2Q9Y5L3 495 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 IGHV5-51A0A0C4DH38 117 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 A0A0J9YY10 115 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 OR2A25A4D2G3 310 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SLC9B1P1A6NJY1 282 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 MAGEB17A8MXT2 336 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 AGRPO00253 132 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 CBFA2T3O75081 653 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 HNF4AP41235 474 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 GPR3P46089 330 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 DAB2P98082 770 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SLC5A12Q1EHB4 618 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 AASDHQ4L235 1098 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 FIGLAQ6QHK4 219 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 LAS2Q8IYD9 372 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SELENOMQ8WWX9 145 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 SLC22A18Q96BI1 424 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 MAELQ96JY0 434 aaKnown RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 MARK4Q96L34 752 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 EFCAB11Q9BUY7 163 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 ELOVL6Q9H5J4 265 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 HCN4Q9Y3Q4 1203 aa17.16■□□□□ 0.34
CACNB3-202ENST00000536187 COL27A1Q8IZC6 1860 aaPredicted RBP17.16■□□□□ 0.34
CACNB3-202ENST00000536187 ADAMTS20P59510 1910 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 FLRT2O43155 660 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 OR1F1O43749 312 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 RPLP0P05388 317 aaKnown RBP17.15■□□□□ 0.34
CACNB3-202ENST00000536187 CD1EP15812 388 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 HK2P52789 917 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 ARFIP2P53365 341 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 ABATP80404 500 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 DEFB110Q30KQ9 67 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 LSM12Q3MHD2 195 aaKnown RBP17.15■□□□□ 0.34
CACNB3-202ENST00000536187 SNAP47Q5SQN1 464 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 FRMPD2BQ6IN97 320 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 ARMC6Q6NXE6 501 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 MED27Q6P2C8 311 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 FBXO42Q6P3S6 717 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 TMIGD1Q6UXZ0 262 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 RIPOR1Q6ZS17 1223 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 NAXDQ8IW45 347 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 AHCYL2Q96HN2 611 aaKnown RBP17.15■□□□□ 0.34
CACNB3-202ENST00000536187 SEC16BQ96JE7 1060 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 TRAPPC9Q96Q05 1148 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 AKTIPQ9H8T0 292 aa17.15■□□□□ 0.34
CACNB3-202ENST00000536187 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.15■□□□□ 0.34
CACNB3-202ENST00000536187 TNFSF14O43557 240 aa17.14■□□□□ 0.33
CACNB3-202ENST00000536187 ULK1O75385 1050 aa17.14■□□□□ 0.33
CACNB3-202ENST00000536187 CDH3P22223 829 aa17.14■□□□□ 0.33
CACNB3-202ENST00000536187 RPS13P62277 151 aaKnown RBP17.14■□□□□ 0.33
CACNB3-202ENST00000536187 SUZ12Q15022 739 aaKnown RBP17.14■□□□□ 0.33
CACNB3-202ENST00000536187 BAHD1Q8TBE0 780 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms