RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ERGP11308 486 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 ETS1P14921 441 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 CD46P15529 392 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 ABOP16442 354 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 NMBRP28336 390 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 SSTR2P30874 369 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 NPY2RP49146 381 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 YBX1P67809 324 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 ALDH6A1Q02252 535 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 SRSF11Q05519 484 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 PRDX1Q06830 199 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 FAM53BQ14153 422 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 KLHL38Q2WGJ6 581 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 TMEM205Q6UW68 189 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 RAD9BQ6WBX8 426 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 PRUNE1Q86TP1 453 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 EID3Q8N140 333 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 HORMAD2Q8N7B1 307 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 CHTF18Q8WVB6 975 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 HES6Q96HZ4 224 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 UTP23Q9BRU9 249 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 KLHL1Q9NR64 748 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
TNFRSF1A-207ENST00000535958 ANKRD17O75179 2603 aaKnown RBP12.27□□□□□ -0.44
TNFRSF1A-207ENST00000535958 OTOGQ6ZRI0 2925 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 GOLGA8KD6RF30 607 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 H0YIG0 161 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 HAT1O14929 419 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 FOXS1O43638 330 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 PSIP1O75475 530 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CLDN14O95500 239 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 AGAP20933 346 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 MGAT1P26572 445 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 AGTR2P50052 363 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TAS2R50P59544 299 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 OC90Q02509 493 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 PTK6Q13882 451 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 EXT1Q16394 746 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 C3AR1Q16581 482 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 MEP1AQ16819 746 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 KRTCAP3Q53RY4 240 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ACER2Q5QJU3 275 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 PLAG1Q6DJT9 500 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 LANCL3Q6ZV70 420 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 SLC13A5Q86YT5 568 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CEP97Q8IW35 865 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 BEST3Q8N1M1 668 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 PPFIBP2Q8ND30 876 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 OR9A4Q8NGU2 314 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 LPGAT1Q92604 370 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 MTFMTQ96DP5 389 aaKnown RBP12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 IMMP1LQ96LU5 166 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 GPR137Q96N19 417 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 BIRC8Q96P09 236 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 OR2A5Q96R48 311 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TCF12Q99081 682 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 PKP4Q99569 1192 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 BAG1Q99933 345 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TSGA10Q9BZW7 698 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 VN1R1Q9GZP7 353 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 C2CD3Q4AC94 2353 aa12.27□□□□□ -0.45
TNFRSF1A-207ENST00000535958 IGKV1-8A0A0C4DH67 115 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CTAGE9A4FU28 777 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 P2RX6O15547 441 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 NSA2O95478 260 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 SLC16A8O95907 504 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 OGNP20774 298 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 XCR1P46094 333 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ZNF75DP51815 510 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ADARP55265 1226 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 RPS15AP62244 130 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 SARNPP82979 210 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ACTN3Q08043 901 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TUBA3CQ13748 450 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 OR1C1Q15619 314 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TYSND1Q2T9J0 566 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ACSBG2Q5FVE4 666 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 FCRLBQ6BAA4 426 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ZNF425Q6IV72 752 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CASC4Q6P4E1 433 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TUBA3EQ6PEY2 450 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CES3Q6UWW8 571 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 PLD3Q8IV08 490 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 SLC5A8Q8N695 610 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 OR51Q1Q8NH59 317 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 THAP3Q8WTV1 239 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 MFSD3Q96ES6 412 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CYTH2Q99418 400 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 TSPAN10Q9H1Z9 355 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 ANKHQ9HCJ1 492 aa12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 CCDC177Q9NQR7 707 aaPredicted RBP12.26□□□□□ -0.45
TNFRSF1A-207ENST00000535958 SYBUQ9NX95 663 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms