RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 MFSD3Q96ES6 412 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 SCMH1Q96GD3 660 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CCDC120Q96HB5 630 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CABS1Q96KC9 395 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CNDP1Q96KN2 507 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CYTH2Q99418 400 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 TSGA10Q9BZW7 698 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CLK4Q9HAZ1 481 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 TMEM184CQ9NVA4 438 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 TRPC4Q9UBN4 977 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 SLC22A7Q9Y694 548 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 FAM237BA0A1B0GVD1 139 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 WFS1O76024 890 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 RASAL1O95294 804 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MPC1LP0DKB6 136 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 C8orf89P0DMQ9 161 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MST1P26927 711 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MAGEA3P43357 314 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 BDKRB1P46663 353 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 AGTR2P50052 363 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 RIPPLY3P57055 190 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 NDUFA9Q16795 377 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 LONRF1Q17RB8 773 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 HKDC1Q2TB90 917 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 KLHL38Q2WGJ6 581 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 SEL1L2Q5TEA6 688 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 LRRC8EQ6NSJ5 796 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 TMEM214Q6NUQ4 689 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 HIBCHQ6NVY1 386 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 NEPROQ6NW34 567 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 TMEM207Q6UWW9 146 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 VN1R4Q7Z5H5 301 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 STRA8Q7Z7C7 330 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 KIAA1328Q86T90 577 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 TAX1BP1Q86VP1 789 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 FJX1Q86VR8 437 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 REXO1L1PQ8IX06 675 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 AFAP1L2Q8N4X5 818 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MDS2Q8NDY4 140 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MCUQ8NE86 351 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 M1APQ8TC57 530 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 PHF10Q8WUB8 498 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MAIP1Q8WWC4 291 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 C1orf54Q8WWF1 131 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 RERGQ96A58 199 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 ZNF354BQ96LW1 612 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 OR1F2PQ96R84 312 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 PKP4Q99569 1192 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 UNKQ9C0B0 810 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 VN1R1Q9GZP7 353 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 PCBD2Q9H0N5 130 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 MMP25Q9NPA2 562 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 STMN3Q9NZ72 180 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 PTGFRNQ9P2B2 879 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 SUCOQ9UBS9 1254 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 AKAP9Q99996 3911 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 ITPR3Q14573 2671 aa10.61□□□□□ -0.71
CLSTN3-206ENST00000535668 PRSS44E7EML9 344 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 NIPSNAP2O75323 286 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 HEXBP07686 556 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ANXA5P08758 320 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ITGAMP11215 1152 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ETS1P14921 441 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 CAPN3P20807 821 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 CDC25BP30305 580 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 RPA3P35244 121 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 BCL6P41182 706 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 AVPR1BP47901 424 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 EIF3BP55884 814 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 SESN2P58004 480 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 RPS15AP62244 130 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 MPP1Q00013 466 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 MEF2AQ02078 507 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 RBPJQ06330 500 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 KCNJ11Q14654 390 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 TESK1Q15569 626 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 EXT1Q16394 746 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 TTLL9Q3SXZ7 439 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ACSBG2Q5FVE4 666 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ACER2Q5QJU3 275 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ABHD17BQ5VST6 288 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 NIPAL1Q6NVV3 410 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 GFRALQ6UXV0 394 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 GDF7Q7Z4P5 450 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 CPEB2Q7Z5Q1 589 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 MRGPRGQ86SM5 289 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 SIAH3Q8IW03 269 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 METTL27Q8N6F8 245 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ABHD11Q8NFV4 315 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 ADAMTS18Q8TE60 1221 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 MMABQ96EY8 250 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 C14orf79Q96F83 325 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 SPOCK3Q9BQ16 436 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 TRIM8Q9BZR9 551 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 PLA2G3Q9NZ20 509 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 SEC14L3Q9UDX4 400 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 C19orf25Q9UFG5 118 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 CIDEBQ9UHD4 219 aa10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 RUVBL2Q9Y230 463 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-206ENST00000535668 DHRS7Q9Y394 339 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms