RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
CCDC7-207ENST00000535327 IL11RAQ14626 422 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 TMEM132DQ14C87 1099 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 UGT3A2Q3SY77 523 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 C6orf163Q5TEZ5 329 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 FGFRL1Q8N441 504 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 SSMEM1Q8WWF3 244 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 CNDP2Q96KP4 475 aaKnown RBP3.82□□□□□ -1.8
CCDC7-207ENST00000535327 C2orf48Q96LS8 159 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 SFXN2Q96NB2 322 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 CENPOQ9BU64 300 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 GOLPH3LQ9H4A5 285 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 HAO2Q9NYQ3 351 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 CFDP1Q9UEE9 299 aaPredicted RBP3.82□□□□□ -1.8
CCDC7-207ENST00000535327 TRIM17Q9Y577 477 aa3.82□□□□□ -1.8
CCDC7-207ENST00000535327 EDDM13A0A1B0GTR0 161 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 HPP00738 406 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 ZBTB25P24278 435 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 EEF1B2P24534 225 aaKnown RBP3.81□□□□□ -1.8
CCDC7-207ENST00000535327 PCGF2P35227 344 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 CRY2Q49AN0 593 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 TCP11X2Q5H9J9 407 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 ARMC4Q5T2S8 1044 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 KRT39Q6A163 491 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 ARHGAP22Q7Z5H3 698 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 IQCHQ86VS3 1027 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 SLC37A3Q8NCC5 494 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 CCDC191Q8NCU4 936 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 NXNL1Q96CM4 212 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 CYYR1Q96J86 154 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 CNOT6LQ96LI5 555 aaKnown RBP3.81□□□□□ -1.8
CCDC7-207ENST00000535327 ZNF830Q96NB3 372 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-207ENST00000535327 HOXD1Q9GZZ0 328 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 FAM49AQ9H0Q0 323 aaPredicted RBP3.81□□□□□ -1.8
CCDC7-207ENST00000535327 ADNPQ9H2P0 1102 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 PARLQ9H300 379 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 NOL11Q9H8H0 719 aaKnown RBP3.81□□□□□ -1.8
CCDC7-207ENST00000535327 ANKZF1Q9H8Y5 726 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 B4GALT7Q9UBV7 327 aa3.81□□□□□ -1.8
CCDC7-207ENST00000535327 IGHV4-30-2A0A087WSY4 118 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 NPIPB9F8W1W9 429 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 GGPS1O95749 300 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 RAB28P51157 221 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 IRX4P78413 519 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 PTPRCAPQ14761 206 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 RNASEH2BQ5TBB1 312 aaKnown RBP3.8□□□□□ -1.8
CCDC7-207ENST00000535327 CST9LP1Q5W188 147 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 FAM166AQ6J272 317 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 NOTUMQ6P988 496 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 DET1Q7L5Y6 550 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 CHST3Q7LGC8 479 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 NUDT13Q86X67 352 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 MMD2Q8IY49 270 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 GPD1LQ8N335 351 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 SECISBP2LQ93073 1101 aaKnown RBP3.8□□□□□ -1.8
CCDC7-207ENST00000535327 HDAC11Q96DB2 347 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 SPDL1Q96EA4 605 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 PGAP3Q96FM1 320 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-207ENST00000535327 LINC00167Q96N53 147 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 LPAR4Q99677 370 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 CHCHD5Q9BSY4 110 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 PANK2Q9BZ23 570 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 GPN1Q9HCN4 374 aaPredicted RBP3.8□□□□□ -1.8
CCDC7-207ENST00000535327 VSIG4Q9Y279 399 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 R4GN57 208 aa3.8□□□□□ -1.8
CCDC7-207ENST00000535327 A0A087WWV3 80 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 UBE2CO00762 179 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 TEX28O15482 410 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 DKC1O60832 514 aaKnown RBP eCLIP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 TOMM70O94826 608 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 APOA4P06727 396 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 CENPBP07199 599 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 CPT2P23786 658 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 POU5F1Q01860 360 aaKnown RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 RALGDSQ12967 914 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 ITGA7Q13683 1181 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 TAB1Q15750 504 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 KYNUQ16719 465 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 LCLAT1Q6UWP7 414 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 CDHR3Q6ZTQ4 885 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 RTL3Q8N8U3 475 aaKnown RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 RMDN1Q96DB5 314 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 C4orf45Q96LM5 186 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 CFAP57Q96MR6 1250 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 SERINC2Q96SA4 455 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 BAG1Q99933 345 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 NYXQ9GZU5 481 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 OLAHQ9NV23 265 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 NFKBIL1Q9UBC1 381 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 C19orf25Q9UFG5 118 aaPredicted RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 CPSF3Q9UKF6 684 aaKnown RBP3.79□□□□□ -1.8
CCDC7-207ENST00000535327 TSPAN16Q9UKR8 245 aa3.79□□□□□ -1.8
CCDC7-207ENST00000535327 H0YAE9 185 aa3.78□□□□□ -1.8
CCDC7-207ENST00000535327 ZNF354AO60765 605 aaPredicted RBP3.78□□□□□ -1.8
CCDC7-207ENST00000535327 PSMD10O75832 226 aa3.78□□□□□ -1.8
CCDC7-207ENST00000535327 CEACAM4O75871 244 aa3.78□□□□□ -1.8
CCDC7-207ENST00000535327 FYNP06241 537 aa3.78□□□□□ -1.8
CCDC7-207ENST00000535327 DANCRP0C864 163 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms