RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 COG2Q14746 738 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 KIR2DS3Q14952 304 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 CCL14Q16627 93 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 ASTE1Q2TB18 679 aaPredicted RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 GAGE2EQ4V326 116 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 RARS2Q5T160 578 aaKnown RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 CCDC183Q5T5S1 534 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 PLA2G4FQ68DD2 849 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 ADAM5Q6NVV9 412 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 PLBD1Q6P4A8 553 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 STOX1Q6ZVD7 989 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 CATSPER4Q7RTX7 472 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 SZRD1Q7Z422 152 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 UNC45BQ8IWX7 931 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 OR8H3Q8N146 312 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 RASGEF1CQ8N431 466 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 SLC5A8Q8N695 610 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 GMCL1P1Q8NEA9 526 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 TRPV1Q8NER1 839 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 GPRC5AQ8NFJ5 357 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 OR8K5Q8NH50 307 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 MGARPQ8TDB4 240 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 ALG14Q96F25 216 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 C17orf77Q96MU5 243 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 CCDC43Q96MW1 224 aaKnown RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 DACH2Q96NX9 599 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 OR2A14Q96R47 310 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 NUDCD1Q96RS6 583 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 MOV10L1Q9BXT6 1211 aaKnown RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 MAK16Q9BXY0 300 aaKnown RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 ITPAQ9BY32 194 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 LSG1Q9H089 658 aaKnown RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 FAM107BQ9H098 131 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 LRMDAQ9H2I8 198 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 HOMER3Q9NSC5 361 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 RCC2Q9P258 522 aaKnown RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 CLIP2Q9UDT6 1046 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 GAGE2DQ9UEU5 116 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 GTF3C4Q9UKN8 822 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 PCDHGB4Q9UN71 923 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 RIPK3Q9Y572 518 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 SESN1Q9Y6P5 492 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 ZFP37Q9Y6Q3 630 aaPredicted RBP3.24□□□□□ -1.89
USP48-215ENST00000534705 RALGAPA2Q2PPJ7 1873 aa3.24□□□□□ -1.89
USP48-215ENST00000534705 ASTN1O14525 1302 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 A0A0G2JNG1 304 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 FRMD3A2A2Y4 597 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 TMEM8BA6NDV4 472 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SLC15A5A6NIM6 579 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 PTGES3LE9PB15 166 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 HIP1O00291 1037 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 TRANK1O15050 2925 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 KINO60870 393 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 FLOT1O75955 427 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 BEST1O76090 585 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CSPG5O95196 566 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SRPRAP08240 638 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 PDHBP11177 359 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 PCP11498 1178 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 SKILP12757 684 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CYBAP13498 195 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CCL5P13501 91 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 ANK1P16157 1881 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CYP2B6P20813 491 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 NR2F2P24468 414 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 HOXD10P28358 340 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 MAPK4P31152 587 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 HNF4AP41235 474 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 VEGFCP49767 419 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 ZNF75DP51815 510 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 GALCP54803 685 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 RBP5P82980 135 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CCZ1BP86790 482 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CCZ1P86791 482 aaPredicted RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 SPOCK1Q08629 439 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 AIMP2Q13155 320 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 KIR2DS5Q14953 304 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 DUSP28Q4G0W2 176 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 TCP11X2Q5H9J9 407 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SLC35E4Q6ICL7 350 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 KLHL35Q6PF15 583 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 IL27RAQ6UWB1 636 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 PACS1Q6VY07 963 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 RAD9BQ6WBX8 426 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 MFSD6Q6ZSS7 791 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SLFN11Q7Z7L1 901 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 CCDC190Q86UF4 302 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 THNSL1Q8IYQ7 743 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 ZNF444Q8N0Y2 327 aaPredicted RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 NUP93Q8N1F7 819 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 TTC39CQ8N584 583 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 C1orf52Q8N6N3 182 aaKnown RBP3.23□□□□□ -1.89
USP48-215ENST00000534705 TMCO5AQ8N6Q1 288 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 TRIML1Q8N9V2 468 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 FAM76AQ8TAV0 307 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 RAET1EQ8TD07 263 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SMPDL3BQ92485 455 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 FBXO17Q96EF6 278 aa3.23□□□□□ -1.89
USP48-215ENST00000534705 SEMA3CQ99985 751 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms