RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 NEURL2Q9BR09 285 aa17.05■□□□□ 0.32
CTSB-232ENST00000534510 EMILIN2Q9BXX0 1053 aa17.05■□□□□ 0.32
CTSB-232ENST00000534510 CPEB1Q9BZB8 566 aaKnown RBP17.05■□□□□ 0.32
CTSB-232ENST00000534510 ZDHHC6Q9H6R6 413 aa17.05■□□□□ 0.32
CTSB-232ENST00000534510 TRNAU1APQ9NX07 287 aaKnown RBP17.05■□□□□ 0.32
CTSB-232ENST00000534510 CORO2BQ9UQ03 480 aa17.05■□□□□ 0.32
CTSB-232ENST00000534510 AP1M2Q9Y6Q5 423 aa17.05■□□□□ 0.32
CTSB-232ENST00000534510 COL4A6Q14031 1691 aa17.05■□□□□ 0.32
CTSB-232ENST00000534510 EFNA1P20827 205 aaPredicted RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 PPIBP23284 216 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 ALDH4A1P30038 563 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 VBP1P61758 197 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 ACSM2AQ08AH3 577 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 PROX2Q3B8N5 592 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 XKR6Q5GH73 641 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 ACSM2BQ68CK6 577 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 PDE12Q6L8Q7 609 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 SERPINA13PQ6UXR4 307 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 WDR20Q8TBZ3 569 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 ELMO1Q92556 727 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 MRPS31Q92665 395 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 TAMM41Q96BW9 452 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 TMEM169Q96HH4 297 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 METTL2AQ96IZ6 378 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 BBS2Q9BXC9 721 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 BRD9Q9H8M2 597 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 HMX1Q9NP08 348 aaPredicted RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 PCDH12Q9NPG4 1184 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 SPATA6Q9NWH7 488 aaPredicted RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 B4GALT6Q9UBX8 382 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 HS3ST2Q9Y278 367 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 KRT87PA6NCN2 255 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 SCAMP2O15127 329 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 INHAP05111 366 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 URODP06132 367 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 HSD3B1P14060 373 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 CD22P20273 847 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 HSD3B2P26439 372 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 LSM3P62310 102 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 CSNK2BP67870 215 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 NPRL3Q12980 569 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 DGCR6Q14129 220 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 SMN1Q16637 294 aaKnown RBP17.04■□□□□ 0.32
CTSB-232ENST00000534510 RASGRP3Q8IV61 690 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 MFSD4AQ8N468 514 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 ITPKCQ96DU7 683 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 TPD52L3Q96J77 140 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 MYOCQ99972 504 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 DUSP26Q9BV47 211 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 ARMC7Q9H6L4 198 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 EPS8L2Q9H6S3 715 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 TPT1P8Q9HAU6 139 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 ADPRHL2Q9NX46 363 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 CD84Q9UIB8 345 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 BTNL2Q9UIR0 455 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 MAPRE3Q9UPY8 281 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 DENND4CQ5VZ89 1909 aa17.04■□□□□ 0.32
CTSB-232ENST00000534510 A0A1W2PQ67 120 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 E9PQ18 207 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 ATP6V1G1O75348 118 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 POP4O95707 220 aaKnown RBP17.03■□□□□ 0.32
CTSB-232ENST00000534510 GNRH1P01148 92 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 GSTM1P09488 218 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 LAMP1P11279 417 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 GABRR2P28476 465 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 ASMTP46597 345 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 RPP38P78345 283 aaKnown RBP17.03■□□□□ 0.32
CTSB-232ENST00000534510 SLC7A9P82251 487 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 FADDQ13158 208 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 CAMK2GQ13555 558 aaPredicted RBP17.03■□□□□ 0.32
CTSB-232ENST00000534510 GRHL2Q6ISB3 625 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■□□□□ 9
CTSB-232ENST00000534510 THOC6Q86W42 341 aaKnown RBP17.03■□□□□ 0.32
CTSB-232ENST00000534510 OR6Q1Q8NGQ2 317 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 SH3KBP1Q96B97 665 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 LMLNQ96KR4 655 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 RHNO1Q9BSD3 238 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 GABARAPL3Q9BY60 117 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 CHST8Q9H2A9 424 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 GIN1Q9NXP7 522 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 SLC25A13Q9UJS0 675 aa17.03■□□□□ 0.32
CTSB-232ENST00000534510 OR2A25A4D2G3 310 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 AP2A2O94973 939 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 CXCL10P02778 98 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 ALOX5P09917 674 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 TPP2P29144 1249 aaPredicted RBP17.02■□□□□ 0.32
CTSB-232ENST00000534510 EPHA2P29317 976 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 RXRGP48443 463 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 DDX39BQ13838 428 aaKnown RBP17.02■□□□□ 0.32
CTSB-232ENST00000534510 INAQ16352 499 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 CCDC71Q8IV32 467 aaPredicted RBP17.02■□□□□ 0.32
CTSB-232ENST00000534510 CD99L2Q8TCZ2 262 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 ASZ1Q8WWH4 475 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 FCGR1BQ92637 280 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 CLP1Q92989 425 aaKnown RBP17.02■□□□□ 0.32
CTSB-232ENST00000534510 ZNF558Q96NG5 402 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 MTERF1Q99551 399 aaKnown RBP17.02■□□□□ 0.32
CTSB-232ENST00000534510 CEP44Q9C0F1 390 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 BRF2Q9HAW0 419 aa17.02■□□□□ 0.32
CTSB-232ENST00000534510 RASSF1Q9NS23 344 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms