RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ZNF295-AS1Q8N0V1 137 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 METTL21AQ8WXB1 218 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 PKP4Q99569 1192 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 VN1R1Q9GZP7 353 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 EIF2B3Q9NR50 452 aaKnown RBP20.18■□□□□ 0.82
SSH3-211ENST00000534112 FAM114A2Q9NRY5 505 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 BFARQ9NZS9 450 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 GALPQ9UBC7 116 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 PCYOX1Q9UHG3 505 aa20.18■□□□□ 0.82
SSH3-211ENST00000534112 IGHV3-20A0A0C4DH32 117 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 GOLGA8KD6RF30 607 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 GOLGA8TH3BQL2 631 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 P2RX6O15547 441 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 SEC24DO94855 1032 aaPredicted RBP20.17■□□□□ 0.82
SSH3-211ENST00000534112 CCNDBP1O95273 360 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 ESR1P03372 595 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 NPY2RP49146 381 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 SNRPNP63162 240 aaKnown RBP20.17■□□□□ 0.82
SSH3-211ENST00000534112 KLHL38Q2WGJ6 581 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 CES3Q6UWW8 571 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 SLC13A5Q86YT5 568 aaPredicted RBP20.17■□□□□ 0.82
SSH3-211ENST00000534112 MFSD3Q96ES6 412 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 CYTH2Q99418 400 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 TINAGQ9UJW2 476 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 CRYL1Q9Y2S2 319 aa20.17■□□□□ 0.82
SSH3-211ENST00000534112 ZNF839A8K0R7 811 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 SLC16A8O95907 504 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 CATP04040 527 aaKnown RBP20.16■□□□□ 0.82
SSH3-211ENST00000534112 ESRRAP11474 423 aaPredicted RBP20.16■□□□□ 0.82
SSH3-211ENST00000534112 AGAP20933 346 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 AVPR1BP47901 424 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 ADARP55265 1226 aaKnown RBP20.16■□□□□ 0.82
SSH3-211ENST00000534112 NDUFA9Q16795 377 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 TYSND1Q2T9J0 566 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 ACER2Q5QJU3 275 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 RNF187Q5TA31 235 aaPredicted RBP20.16■□□□□ 0.82
SSH3-211ENST00000534112 SEL1L2Q5TEA6 688 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 PLAG1Q6DJT9 500 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 CPEB2Q7Z5Q1 589 aaKnown RBP20.16■□□□□ 0.82
SSH3-211ENST00000534112 ADCK2Q7Z695 626 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 PLD3Q8IV08 490 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 PPFIBP2Q8ND30 876 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 OR9A4Q8NGU2 314 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 ADAMTS18Q8TE60 1221 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 ZNF480Q8WV37 535 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 TCF12Q99081 682 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 KIFC1Q9BW19 673 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 PCDHGB6Q9Y5F9 930 aa20.16■□□□□ 0.82
SSH3-211ENST00000534112 ZFHX3Q15911 3703 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 E7ENX8 843 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 HAT1O14929 419 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 PFDN6O15212 129 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 SMSP52788 366 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 ABATP80404 500 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 TAP2Q03519 686 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 BTBD16Q32M84 506 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 MINDY4Q4G0A6 757 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 FCRLBQ6BAA4 426 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 H3F3CQ6NXT2 135 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 LANCL3Q6ZV70 420 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 SHISA5Q8N114 240 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 BEST3Q8N1M1 668 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 THAP3Q8WTV1 239 aaPredicted RBP20.15■□□□□ 0.82
SSH3-211ENST00000534112 ZNF354BQ96LW1 612 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 ABCF3Q9NUQ8 709 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 ITGB1BP2Q9UKP3 347 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 DRG1Q9Y295 367 aaKnown RBP20.15■□□□□ 0.82
SSH3-211ENST00000534112 ZNF835Q9Y2P0 537 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 CAPN6Q9Y6Q1 641 aa20.15■□□□□ 0.82
SSH3-211ENST00000534112 SETD2Q9BYW2 2564 aaPredicted RBP20.15■□□□□ 0.82
SSH3-211ENST00000534112 H0YIG0 161 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 SMAPO00193 183 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 AP3B1O00203 1094 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 TTI1O43156 1089 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 STATHP02808 62 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 CYC1P08574 325 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 MGAT1P26572 445 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 ZNF75DP51815 510 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 TUBA3CQ13748 450 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 KCNJ11Q14654 390 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 CDSNQ15517 529 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 KRTCAP3Q53RY4 240 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 MFSD4BQ5TF39 518 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 TUBA3EQ6PEY2 450 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 SPPL2CQ8IUH8 684 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 REXO1L1PQ8IX06 675 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 TXLNBQ8N3L3 684 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 MAGED4Q96JG8 741 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 GPR137Q96N19 417 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 SIGLEC12Q96PQ1 595 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 EBNA1BP2Q99848 306 aaKnown RBP20.14■□□□□ 0.81
SSH3-211ENST00000534112 SYBUQ9NX95 663 aa20.14■□□□□ 0.81
SSH3-211ENST00000534112 C19orf25Q9UFG5 118 aaPredicted RBP20.14■□□□□ 0.81
SSH3-211ENST00000534112 OR2W5A6NFC9 320 aa20.13■□□□□ 0.81
SSH3-211ENST00000534112 FAM227AF5H4B4 570 aa20.13■□□□□ 0.81
SSH3-211ENST00000534112 H7BY64 318 aa20.13■□□□□ 0.81
SSH3-211ENST00000534112 C19orf84I3L1E1 186 aa20.13■□□□□ 0.81
SSH3-211ENST00000534112 CD96P40200 585 aa20.13■□□□□ 0.81
SSH3-211ENST00000534112 BASP1P80723 227 aaKnown RBP20.13■□□□□ 0.81
SSH3-211ENST00000534112 Q6ZPB1 254 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms