RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZGLP1P0C6A0 271 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 IL1RNP18510 177 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 GDF5P43026 501 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 OLR1P78380 273 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 PPP1R3AQ16821 1122 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ZC3H12BQ5HYM0 836 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 THEMIS2Q5TEJ8 643 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 B3GNTL1Q67FW5 361 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 DUPD1Q68J44 220 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CLEC18BQ6UXF7 455 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 LANCL3Q6ZV70 420 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 STRA8Q7Z7C7 330 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CUZD1Q86UP6 607 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SLC26A11Q86WA9 606 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ZC3HC1Q86WB0 502 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ZC3H7AQ8IWR0 971 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ZBED8Q8IZ13 594 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CISD2Q8N5K1 135 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CLEC18CQ8NCF0 446 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 PSMF1Q92530 271 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 MMABQ96EY8 250 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CABS1Q96KC9 395 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SMAD5Q99717 465 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 DPH2Q9BQC3 489 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 YIPF2Q9BWQ6 316 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SGPP1Q9BX95 441 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 RAB11FIP5Q9BXF6 653 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 RBCK1Q9BYM8 510 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 CCDC68Q9H2F9 335 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 KLHL31Q9H511 634 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ZNF304Q9HCX3 659 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SAYSD1Q9NPB0 183 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 GPR83Q9NYM4 423 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 PLA2G3Q9NZ20 509 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 HCN3Q9P1Z3 774 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 KLHL42Q9P2K6 505 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 ANAPC2Q9UJX6 822 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SRPK3Q9UPE1 567 aa9.15□□□□□ -0.94
SSBP3-215ENST00000533946 PCDHGA9Q9Y5G4 932 aaKnown RBP9.15□□□□□ -0.94
SSBP3-215ENST00000533946 SVILO95425 2214 aa9.15□□□□□ -0.95
SSBP3-215ENST00000533946 ESPL1Q14674 2120 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 FAM95CA0A1B0GW59 222 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TTLL8A6PVC2 850 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 AGPSO00116 658 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 MAN1A2O60476 641 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 SRPX2O60687 465 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-215ENST00000533946 SEMA7AO75326 666 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 COX6A1P12074 109 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 FBLP22087 321 aaKnown RBP9.14□□□□□ -0.95
SSBP3-215ENST00000533946 MMP11P24347 488 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 VARSP26640 1264 aaKnown RBP9.14□□□□□ -0.95
SSBP3-215ENST00000533946 SLC26A3P40879 764 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ARSFP54793 590 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ARL4CP56559 192 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 DLG1Q12959 904 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ARHGAP19Q14CB8 494 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 OR4D1Q15615 310 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 INPP5JQ15735 1006 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TTLL9Q3SXZ7 439 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 CRB2Q5IJ48 1285 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TCTE1Q5JU00 501 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 PRAMEF13Q5VWM6 474 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ATG9BQ674R7 924 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 LINC00696Q6ZRV3 163 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 MED25Q71SY5 747 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 RAB43Q86YS6 212 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 PDIK1LQ8N165 341 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ANKRD53Q8N9V6 530 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TTC29Q8NA56 475 aaPredicted RBP9.14□□□□□ -0.95
SSBP3-215ENST00000533946 CPT1CQ8TCG5 803 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 CALML6Q8TD86 181 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TM4SF19Q96DZ7 209 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ERP44Q9BS26 406 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 DHRS4Q9BTZ2 278 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 CRB3Q9BUF7 120 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 SLC26A1Q9H2B4 701 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 PARVBQ9HBI1 364 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ZNF160Q9HCG1 818 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 FAM114A2Q9NRY5 505 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 ASF1BQ9NVP2 202 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TAS2R13Q9NYV9 303 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TRPC4Q9UBN4 977 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 C3orf18Q9UK00 162 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 MAP4K5Q9Y4K4 846 aa9.14□□□□□ -0.95
SSBP3-215ENST00000533946 TEX15Q9BXT5 2789 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 IGLV3-12A0A075B6K2 115 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 IDSB3KWA1 339 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 TCP11X1B4DZS4 312 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 TAPBPO15533 448 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 KDM1AO60341 852 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 RDH16O75452 317 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 TTC4O95801 387 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 TBX6O95947 436 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 ENO3P13929 434 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-215ENST00000533946 ITGA3P26006 1051 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 HNF4AP41235 474 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 PLTPP55058 493 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 MGAT5Q09328 741 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 HYAL2Q12891 473 aa9.13□□□□□ -0.95
SSBP3-215ENST00000533946 PDAP1Q13442 181 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms