RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TXNDC9O14530 226 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 SLC16A5O15375 505 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 KLHL41O60662 606 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 SORBS2O94875 1100 aaKnown RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 GUCA1CO95843 209 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 UQCRHP07919 91 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 CDH1P12830 882 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ACPPP15309 386 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 FDXRP22570 491 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 GNLYP22749 145 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 CD97P48960 835 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 EMP2P54851 167 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 MAT1AQ00266 395 aaKnown RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 EEF1A2Q05639 463 aaKnown RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 MGAT5Q09328 741 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 SP140Q13342 867 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 DSG2Q14126 1118 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 FASTKD3Q14CZ7 662 aaKnown RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 INPP5JQ15735 1006 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 NDUFA9Q16795 377 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 SYT16Q17RD7 645 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 PLEKHN1Q494U1 663 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 MFSD4BQ5TF39 518 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 STEAP4Q687X5 459 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 FAM45BPQ6NSW5 357 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZGRF1Q86YA3 2104 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 HPS6Q86YV9 775 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZBED8Q8IZ13 594 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZADH2Q8N4Q0 377 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 OR11G2Q8NGC1 345 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZCCHC10Q8TBK6 192 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 FAM45AQ8TCE6 357 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 TM9SF4Q92544 642 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 PNPLA2Q96AD5 504 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 PYCR2Q96C36 320 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 LRRC39Q96DD0 335 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 OLFM1Q99784 485 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 MACROD1Q9BQ69 325 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 TRIM54Q9BYV2 358 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 DRC3Q9H069 523 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ILKAPQ9H0C8 392 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 PCBD2Q9H0N5 130 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZNF552Q9H707 407 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZBTB20Q9HC78 741 aaPredicted RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 ZNF160Q9HCG1 818 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 TMEM184CQ9NVA4 438 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 C5AR2Q9P296 337 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 VWA7Q9Y334 891 aa9.93□□□□□ -0.82
CAPN1-225ENST00000533704 MRPS2Q9Y399 296 aaKnown RBP9.93□□□□□ -0.82
CAPN1-225ENST00000533704 USP9XQ93008 2570 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 IDSB3KWA1 339 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 FANCGO15287 622 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 IPO13O94829 963 aaKnown RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 HEXBP07686 556 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CXCR2P25025 360 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CASQ1P31415 396 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 GRK3P35626 688 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 AVPR1BP47901 424 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 EMP3P54852 163 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 RPS15AP62244 130 aaKnown RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 MEF2AQ02078 507 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 C2orf54Q08AI8 447 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CALCOCO2Q13137 446 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 UBAP2LQ14157 1087 aaKnown RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 GARNL3Q5VVW2 1013 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CAPN13Q6MZZ7 669 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 STRA8Q7Z7C7 330 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 GALNT7Q86SF2 657 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 LAPTM4BQ86VI4 370 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CISD2Q8N5K1 135 aaKnown RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 Q8NA96 180 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 OR9A4Q8NGU2 314 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 MVB12AQ96EY5 273 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 THOC3Q96J01 351 aaKnown RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CNDP1Q96KN2 507 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 ENAMQ9NRM1 1142 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 HCN3Q9P1Z3 774 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 RNF14Q9UBS8 474 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CORO1CQ9ULV4 474 aaPredicted RBP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 B3GNT3Q9Y2A9 372 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 MAP4K5Q9Y4K4 846 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 PSAT1Q9Y617 370 aa9.92□□□□□ -0.82
CAPN1-225ENST00000533704 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
CAPN1-225ENST00000533704 CPAMD8Q8IZJ3 1885 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 ICE1Q9Y2F5 2266 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 NSG1A0A0A6YYJ2 146 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 FAM95CA0A1B0GW59 222 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 NPEPPSL1A6NEC2 478 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 NDC80O14777 642 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 FOXS1O43638 330 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 PIAS1O75925 651 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 TSPAN12O95859 305 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 HPP00738 406 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 SERPIND1P05546 499 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 IL1RNP18510 177 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 CCND1P24385 295 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 HRH2P25021 359 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 BCL6P41182 706 aa9.91□□□□□ -0.82
CAPN1-225ENST00000533704 GLRBP48167 497 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms