RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RFPL2O75678 378 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 OXSR1O95747 527 aaPredicted RBP16.08■□□□□ 0.16
CTSB-228ENST00000533455 HMGA1P17096 107 aaKnown RBP16.08■□□□□ 0.16
CTSB-228ENST00000533455 SLC19A1P41440 591 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 CSNK1DP48730 415 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 CSTF3Q12996 717 aaKnown RBP16.08■□□□□ 0.16
CTSB-228ENST00000533455 PRAMEF9Q5VWM5 478 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 AKAP14Q86UN6 197 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 FAM124AQ86V42 546 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 ZSWIM9Q86XI8 627 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 ZNF513Q8N8E2 541 aaPredicted RBP16.08■□□□□ 0.16
CTSB-228ENST00000533455 KBTBD8Q8NFY9 601 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 OR6K2Q8NGY2 324 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 SLX1AQ9BQ83 275 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 DPH2Q9BQC3 489 aaPredicted RBP16.08■□□□□ 0.16
CTSB-228ENST00000533455 RNF38Q9H0F5 515 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 TRPM5Q9NZQ8 1165 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 ATP11BQ9Y2G3 1177 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 PCDHGB3Q9Y5G1 929 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 PCDHGA3Q9Y5H0 932 aa16.08■□□□□ 0.16
CTSB-228ENST00000533455 K7ERQ8 282 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 DSCR3O14972 297 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 TBX1O43435 398 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 KCNK2O95069 426 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 LATS1O95835 1130 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 RPLP0P05388 317 aaKnown RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 MPC1LP0DKB6 136 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 JUPP14923 745 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 CCR7P32248 378 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 MAPK8P45983 427 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 TUFMP49411 452 aaKnown RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 LIMK1P53667 647 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 CRYBA2P53672 197 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 PTCHD3Q3KNS1 767 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 FBXO43Q4G163 708 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 ZNF362Q5T0B9 420 aaPredicted RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 TPRG1LQ5T0D9 272 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 PRSS55Q6UWB4 352 aaPredicted RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 POC5Q8NA72 575 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 GGHQ92820 318 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 CASD1Q96PB1 797 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 TTPALQ9BTX7 342 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 CDADC1Q9BWV3 514 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 EBPLQ9BY08 206 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 ELAC1Q9H777 363 aaKnown RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 RRAGCQ9HB90 399 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 DNAJC11Q9NVH1 559 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 CLCA1A8K7I4 914 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 ADAM12O43184 909 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 VIPP01282 170 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 COX7A2P14406 83 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 C21orf33P30042 268 aaPredicted RBP16.07■□□□□ 0.16
CTSB-228ENST00000533455 SP140Q13342 867 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 CLECL1Q8IZS7 167 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 ASB11Q8WXH4 323 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 HTRA1Q92743 480 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 PROX1Q92786 737 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 LYSMD1Q96S90 227 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 TPT1P8Q9HAU6 139 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 ADPRHL2Q9NX46 363 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.07■□□□□ 0.163e-6■■■■■ 26.9
CTSB-228ENST00000533455 CORO2BQ9UQ03 480 aa16.07■□□□□ 0.16
CTSB-228ENST00000533455 TMEM229AB2RXF0 380 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 GFRA2O00451 464 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 SNPHO15079 494 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 SLC16A5O15375 505 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 SUV39H1O43463 412 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 CPSF4O95639 269 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 HIST1H2AGP0C0S8 130 aaPredicted RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 HIST1H2ADP20671 130 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 PPIBP23284 216 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 RRM2P31350 389 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 PCGF2P35227 344 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 PCYT1AP49585 367 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 B4GALNT1Q00973 533 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 HKDC1Q2TB90 917 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 TAS1R1Q7RTX1 841 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 GPR26Q8NDV2 337 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 FBXO22Q8NEZ5 403 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 WFDC5Q8TCV5 224 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 TPD52L3Q96J77 140 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 HIST1H2AHQ96KK5 128 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 KCNC2Q96PR1 638 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 HIST1H2AJQ99878 128 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 H2AFJQ9BTM1 129 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 C6orf62Q9GZU0 229 aaPredicted RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 SPASTQ9UBP0 616 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 KLHL3Q9UH77 587 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 AFF4Q9UHB7 1163 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 BTNL2Q9UIR0 455 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 POU2F3Q9UKI9 436 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 KIAA1671Q9BY89 1806 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 IGLV3-16A0A075B6K0 115 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 HAT1O14929 419 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 YY2O15391 372 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 SMAD6O43541 496 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 UGDHO60701 494 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 ABCB1P08183 1280 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms