RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 RFPL4AL1F8VTS6 287 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 H3BMQ9 156 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SULT1C2O00338 296 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 STX16O14662 325 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 ZNF197O14709 1029 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 TSPAN4O14817 238 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PSMA7O14818 248 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 KIAA0391O15091 583 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 MATN3O15232 486 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 INPPL1O15357 1258 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CD3EAPO15446 510 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 CHP2O43745 196 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 TBC1D4O60343 1298 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DTNBO60941 627 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PMPCBO75439 489 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 RPP40O75818 363 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 RAD17O75943 681 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 MBP02144 154 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GYPCP04921 128 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SERPINB2P05120 415 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 FCER2P06734 321 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GP1BAP07359 652 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SERPINA6P08185 405 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CD63P08962 238 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 RRASP10301 218 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 IL7P13232 177 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GYPEP15421 78 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DDCP20711 480 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 MMP8P22894 467 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 ITGB8P26012 769 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DDX6P26196 483 aaKnown RBP eCLIP5.34□□□□□ -1.55
CD44-236ENST00000533222 PAX6P26367 422 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 LAP3P28838 519 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PCSK1P29120 753 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CCR1P32246 355 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PGM1P36871 562 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GPX4P36969 197 aaPredicted RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 GRK6P43250 576 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PPP3CCP48454 512 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SRP9P49458 86 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 NDST2P52849 883 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 MLLT10P55197 1068 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 TAS2R40P59535 323 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DEFA1P59665 94 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DEFA3P59666 94 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SNAP25P60880 206 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DEFA6Q01524 100 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 RGS1Q08116 209 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SLC12A1Q13621 1099 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 THOC5Q13769 683 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 KCNJ11Q14654 390 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GRM7Q14831 915 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GRK1Q15835 563 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 BAK1Q16611 211 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 EXOC3L4Q17RC7 722 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 MICAQ29983 383 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 FAM153CQ494X1 144 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 MCMDC2Q4G0Z9 681 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PABPC1L2AQ5JQF8 200 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 MFSD14BQ5SR56 506 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 C1orf185Q5T7R7 199 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 LIPNQ5VXI9 398 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CXorf57Q6NSI4 855 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 TTI2Q6NXR4 508 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 FAM92BQ6ZTR7 304 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SH2D5Q6ZV89 423 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 LRRC8DQ7L1W4 858 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SZRD1Q7Z422 152 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 TRIM69Q86WT6 500 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PPP1R3BQ86XI6 285 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CHERPQ8IWX8 916 aaKnown RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 OR8H3Q8N146 312 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SIX6OS1Q8N1H7 587 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PQLC1Q8N2U9 271 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 PARP8Q8N3A8 854 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CADM2Q8N3J6 435 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GALNT4Q8N4A0 578 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 STX19Q8N4C7 294 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 ATG16L2Q8NAA4 619 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 DMBX1Q8NFW5 382 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 OR52N2Q8NGI0 321 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SPATA20Q8TB22 786 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CREB3L4Q8TEY5 395 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 SLC20A1Q8WUM9 679 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 UBLCP1Q8WVY7 318 aaPredicted RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 C10orf82Q8WW14 230 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 ST8SIA4Q92187 359 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 GTF2H4Q92759 462 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 CD101Q93033 1021 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 VCPIP1Q96JH7 1222 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 KLHL15Q96M94 604 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 ATP6V0BQ99437 205 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 TTYH2Q9BSA4 534 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 EDEM2Q9BV94 578 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 IDI2Q9BXS1 227 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 TINAGL1Q9GZM7 467 aaPredicted RBP5.34□□□□□ -1.55
CD44-236ENST00000533222 SPNS1Q9H2V7 528 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 KLHL31Q9H511 634 aa5.34□□□□□ -1.55
CD44-236ENST00000533222 RANBP3Q9H6Z4 567 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms