RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PRPF4O43172 522 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 PHGDHO43175 533 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 KLF7O75840 302 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC25A14O95258 325 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 HBQ1P09105 142 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 STMN1P16949 149 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CYP2A7P20853 494 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 AGAP20933 346 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CCT5P48643 541 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 RAB10P61026 200 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 TIAL1Q01085 375 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 AIMP2Q13155 320 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 ITIH4Q14624 930 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 PLA2G4EQ3MJ16 856 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPRC6AQ5T6X5 926 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 PRAMEF17Q5VTA0 474 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 AGAP7PQ5VUJ5 663 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 IRAK1BP1Q5VVH5 260 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM45BPQ6NSW5 357 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 ARMC6Q6NXE6 501 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 IGFL2Q6UWQ7 119 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 RAPH1Q70E73 1250 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 ANKRD42Q8N9B4 389 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 GDAP1Q8TB36 358 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM45AQ8TCE6 357 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 DENND1AQ8TEH3 1009 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 TSPAN17Q96FV3 270 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CABS1Q96KC9 395 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 BIRC8Q96P09 236 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 AGAP4Q96P64 663 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 COPS8Q99627 209 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CCDC68Q9H2F9 335 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CNOT10Q9H9A5 744 aaKnown RBP10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 SMOXQ9NWM0 555 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 BTRCQ9Y297 605 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 CSAG2Q9Y5P2 127 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 PRSS21Q9Y6M0 314 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZGRF1Q86YA3 2104 aa10.86□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM221AA4D161 298 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ESR1P03372 595 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 CHN1P15882 459 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 FDXRP22570 491 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 RPS3P23396 243 aaKnown RBP eCLIP10.85□□□□□ -0.672e-8■■■■■ 41.7
TRAPPC4-213ENST00000533149 CRHR1P34998 444 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 RPA3P35244 121 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 FOLR3P41439 243 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ART1P52961 327 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC18A1P54219 525 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ADARP55265 1226 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 KCNK10P57789 538 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 TLE4Q04727 773 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ABRQ12979 859 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF460Q14592 562 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZKSCAN8Q15776 578 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 CYP2A13Q16696 494 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 PTCHD3Q3KNS1 767 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 CTSL3PQ5NE16 218 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 PTRHD1Q6GMV3 140 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 RPUSD3Q6P087 351 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMEM207Q6UWW9 146 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 CDHR3Q6ZTQ4 885 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ADGRG6Q86SQ4 1221 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 OOSP2Q86WS3 158 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 CLDN19Q8N6F1 224 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 MGARPQ8TDB4 240 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 TCP10LQ8TDR4 215 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 GLYATL1Q969I3 302 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 DCUN1D1Q96GG9 259 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 APOPT1Q96IL0 206 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 CNDP1Q96KN2 507 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 VPS35Q96QK1 796 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMUB1Q9BVT8 246 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 C12orf65Q9H3J6 166 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 HRASLS2Q9NWW9 162 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 MKS1Q9NXB0 559 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 NKIRAS1Q9NYS0 192 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 GALPQ9UBC7 116 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 DCDC2Q9UHG0 476 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPN3Q9UHW5 284 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 SERTAD3Q9UJW9 196 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 RUVBL2Q9Y230 463 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 ACOT9Q9Y305 439 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 COMMD10Q9Y6G5 202 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 AKAP9Q99996 3911 aa10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 MDC1Q14676 2089 aaKnown RBP10.85□□□□□ -0.67
TRAPPC4-213ENST00000533149 IGLV3-16A0A075B6K0 115 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 A0A087X1B8 175 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC9B1P1A6NJY1 282 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 IQCF5A8MTL0 148 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMEM150CB9EJG8 249 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MAP3K7O43318 606 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 KCNJ13O60928 360 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 NIPSNAP2O75323 286 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GSTA1P08263 222 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MSL3P1P0C860 447 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC35E2BP0CK96 405 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 COL6A2P12110 1019 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 CHRM3P20309 590 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms