RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 KCNE1BA0A087WTH5 132 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 KHNYNO15037 678 aaKnown RBP17.8■□□□□ 0.44
SMPD1-208ENST00000533123 ULK1O75385 1050 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 ENGP17813 658 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 MMEL1Q495T6 779 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 RFTN2Q52LD8 501 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-208ENST00000533123 THEMIS2Q5TEJ8 643 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 LAIR1Q6GTX8 287 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 OGFOD3Q6PK18 319 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 C16orf89Q6UX73 402 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 RIPOR1Q6ZS17 1223 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 AMIGO1Q86WK6 493 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 HPS6Q86YV9 775 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 SH3KBP1Q96B97 665 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 SGPP1Q9BX95 441 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 MRPL1Q9BYD6 325 aaKnown RBP17.8■□□□□ 0.44
SMPD1-208ENST00000533123 WDR41Q9HAD4 459 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 PPM1DO15297 605 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 CFLARO15519 480 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 KDM1AO60341 852 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 DFNA5O60443 496 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 CER1O95813 267 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 NPPBP16860 134 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 NEK2P51955 445 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 AP5B1Q2VPB7 878 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 PLA2G2CQ5R387 149 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 C6orf132Q5T0Z8 1188 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 PGM2L1Q6PCE3 622 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 KANSL1Q7Z3B3 1105 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 SUMF1Q8NBK3 374 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 OR2L8Q8NGY9 312 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 USP7Q93009 1102 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 SLC25A23Q9BV35 468 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 RAB11FIP5Q9BXF6 653 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 SLC29A3Q9BZD2 475 aa17.8■□□□□ 0.44
SMPD1-208ENST00000533123 NKX1-2Q9UD57 310 aaPredicted RBP17.8■□□□□ 0.44
SMPD1-208ENST00000533123 E7EQ34 232 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CIB2O75838 187 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 PDYNP01213 254 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CAPN3P20807 821 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 UFM1P61960 85 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 YBX1P67809 324 aaKnown RBP17.79■□□□□ 0.44
SMPD1-208ENST00000533123 STX5Q13190 355 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 ZRSR2Q15696 482 aaKnown RBP17.79■□□□□ 0.44
SMPD1-208ENST00000533123 VPS26BQ4G0F5 336 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 C1orf146Q5VVC0 180 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 TMEM26Q6ZUK4 368 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 NET1Q7Z628 596 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-208ENST00000533123 RETREG3Q86VR2 466 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 C17orf82Q86X59 251 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-208ENST00000533123 KLHDC8AQ8IYD2 350 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 GPR156Q8NFN8 814 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 ZFPM2Q8WW38 1151 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 SMPDL3AQ92484 453 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 SRMSQ9H3Y6 488 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 SH2B3Q9UQQ2 575 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 A0A1W2PPV9 198 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 ZNF839A8K0R7 811 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 H0Y3Z8 333 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 NRP2O60462 931 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 MYF5P13349 255 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CD22P20273 847 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 PSMB5P28074 263 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 SHMT2P34897 504 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 FASLGP48023 281 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CCT8P50990 548 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CHIT1Q13231 466 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 BIRC2Q13490 618 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 PGAM4Q8N0Y7 254 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 FBXW8Q8N3Y1 598 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CHCHD4Q8N4Q1 142 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 CDRT15Q96T59 188 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 BRINP2Q9C0B6 783 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 SPHK1Q9NYA1 384 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 TAC3Q9UHF0 121 aa17.79■□□□□ 0.44
SMPD1-208ENST00000533123 POLR3HQ9Y535 204 aaPredicted RBP17.79■□□□□ 0.44
SMPD1-208ENST00000533123 MRASO14807 208 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 RGS14O43566 566 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 RPL38P63173 70 aaKnown RBP17.78■□□□□ 0.44
SMPD1-208ENST00000533123 GGTA1PQ4G0N0 100 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 C14orf28Q4W4Y0 310 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.78■□□□□ 0.44
SMPD1-208ENST00000533123 PRAMEF13Q5VWM6 474 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 TRIM46Q7Z4K8 759 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 SLC35F3Q8IY50 421 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 MINDY1Q8N5J2 469 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 L3MBTL4Q8NA19 623 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 NEIL2Q969S2 332 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 PRRX2Q99811 253 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 ACPTQ9BZG2 426 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 OR6C2Q9NZP2 312 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 KCNE2Q9Y6J6 123 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 BTN3A3O00478 584 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 TRIM38O00635 465 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 CLGNO14967 610 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 YKT6O15498 198 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 KRT36O76013 467 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 KRT6AP02538 564 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 KRT6BP04259 564 aa17.78■□□□□ 0.44
SMPD1-208ENST00000533123 RETP07949 1114 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms