RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 VPS39Q96JC1 886 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 HAUS8Q9BT25 410 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 SEMA3GQ9NS98 782 aa28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 NOVA2Q9UNW9 492 aaKnown RBP28.83■■■□□ 2.21
SSSCA1-207ENST00000533115 SPENQ96T58 3664 aaKnown RBP28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 KCNE1BA0A087WTH5 132 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 SOCS6O14544 535 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 PRPF4O43172 522 aaKnown RBP eCLIP28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 GUCA1CO95843 209 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 RAPSNQ13702 412 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 DSG2Q14126 1118 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 CYS1Q717R9 158 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 GALNT16Q8N428 558 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 FBXO25Q8TCJ0 367 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 ANKRD7Q92527 254 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 MIEF2Q96C03 454 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 PYCR2Q96C36 320 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 THAP11Q96EK4 314 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 C16orf45Q96MC5 204 aaPredicted RBP28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 SMAD5Q99717 465 aaKnown RBP28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 PHACTR1Q9C0D0 580 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 HS3ST3B1Q9Y662 390 aa28.82■■■□□ 2.2
SSSCA1-207ENST00000533115 IGLV3-12A0A075B6K2 115 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 CXorf49A8MYA2 514 aaPredicted RBP28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 ZIC2O95409 532 aaPredicted RBP28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 GSTA2P09210 222 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 ZGLP1P0C6A0 271 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 CDH1P12830 882 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 KLC1Q07866 573 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 TRADDQ15628 312 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 PPP1R3AQ16821 1122 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 C3orf62Q6ZUJ4 267 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 VN1R4Q7Z5H5 301 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 CEP97Q8IW35 865 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 MMABQ96EY8 250 aaPredicted RBP28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 CRB3Q9BUF7 120 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 DRC3Q9H069 523 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 CLMPQ9H6B4 373 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 POPDC3Q9HBV1 291 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 ATP13A2Q9NQ11 1180 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 FBXL4Q9UKA2 621 aa28.81■■■□□ 2.2
SSSCA1-207ENST00000533115 TCRBV9S1A1TA0A576 114 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 MASP2O00187 686 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 FOXS1O43638 330 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 SLC26A3P40879 764 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 FAM53BQ14153 422 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 RBBP7Q16576 425 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 NDUFA9Q16795 377 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 VWA2Q5GFL6 755 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 ZDHHC24Q6UX98 284 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 HPS6Q86YV9 775 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 GPAMQ9HCL2 828 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 TXNDC16Q9P2K2 825 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 TRPC4Q9UBN4 977 aa28.8■■■□□ 2.2
SSSCA1-207ENST00000533115 NUP210LQ5VU65 1888 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 A0A0A6YYC8 382 aaPredicted RBP28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 FEZF1A0PJY2 475 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 I3L1I5 382 aaPredicted RBP28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 CDC7O00311 574 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 DPM1O60762 260 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 STATHP02808 62 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 ANXA5P08758 320 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 GRK3P35626 688 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 SLC12A2P55011 1212 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 SOX8P57073 446 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 GPX6P59796 221 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 POU4F1Q01851 419 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 MYBPC3Q14896 1274 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 KIRREL2Q6UWL6 708 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 PRSS58Q8IYP2 241 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 AMER3Q8N944 861 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 ANKRD49Q8WVL7 239 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 CPNE1Q99829 537 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 YIPF2Q9BWQ6 316 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 MTO1Q9Y2Z2 717 aaKnown RBP28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 MYO18BQ8IUG5 2567 aa28.79■■■□□ 2.2
SSSCA1-207ENST00000533115 UBR5O95071 2799 aaPredicted RBP28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 NPEPPSL1A6NEC2 478 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 FAM159BA6NKW6 160 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 BCL6P41182 706 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 AIMP2Q13155 320 aaKnown RBP28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 NADK2Q4G0N4 442 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 VWA5B1Q5TIE3 1220 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 CCDC25Q86WR0 208 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 ABHD11Q8NFV4 315 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 VPS50Q96JG6 964 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 OR4K3Q96R72 315 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 C5AR2Q9P296 337 aa28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 MRPS2Q9Y399 296 aaKnown RBP28.78■■■□□ 2.2
SSSCA1-207ENST00000533115 LCMT2O60294 686 aaKnown RBP28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 KLHL41O60662 606 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 URI1O94763 535 aaPredicted RBP28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 MAGEA4P43358 317 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 CCR8P51685 355 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 FOXK1P85037 733 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 C8orf74Q6P047 294 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 CAMKVQ8NCB2 501 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 TM4SF19Q96DZ7 209 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 RBBP8Q99708 897 aa28.77■■■□□ 2.2
SSSCA1-207ENST00000533115 FAM129AQ9BZQ8 928 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms