RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 PKMP14618 531 aaKnown RBP12.31□□□□□ -0.44
COPB1-209ENST00000533096 CYLC1P35663 651 aaPredicted RBP12.31□□□□□ -0.44
COPB1-209ENST00000533096 SNRPNP63162 240 aaKnown RBP12.31□□□□□ -0.44
COPB1-209ENST00000533096 CRADDP78560 199 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 PRDX1Q06830 199 aaKnown RBP12.31□□□□□ -0.44
COPB1-209ENST00000533096 GARNL3Q5VVW2 1013 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 SLC25A25Q6KCM7 469 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 ATG4AQ8WYN0 398 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 PRAP1Q96NZ9 151 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 PKP4Q99569 1192 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 P2RY12Q9H244 342 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 RAB6BQ9NRW1 208 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 COQ3Q9NZJ6 369 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 GALPQ9UBC7 116 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 C19orf25Q9UFG5 118 aaPredicted RBP12.31□□□□□ -0.44
COPB1-209ENST00000533096 AMFRQ9UKV5 643 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 PACSIN2Q9UNF0 486 aaPredicted RBP12.31□□□□□ -0.44
COPB1-209ENST00000533096 ZNF148Q9UQR1 794 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 MYO7BQ6PIF6 2116 aa12.31□□□□□ -0.44
COPB1-209ENST00000533096 IGKV1-8A0A0C4DH67 115 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 GABRR3A8MPY1 467 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 GOLGA8KD6RF30 607 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 GOLGA8TH3BQL2 631 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 SGK494L7N484 410 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 TXNDC9O14530 226 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 FANCGO15287 622 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 P2RX6O15547 441 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 NIPSNAP2O75323 286 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 SUN1O94901 812 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 TSPAN12O95859 305 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 APRTP07741 180 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 XCR1P46094 333 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 PNLIPRP1P54315 467 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 ACVR1Q04771 509 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 SNX1Q13596 522 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 NAA25Q14CX7 972 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.3□□□□□ -0.44
COPB1-209ENST00000533096 PCID2Q5JVF3 399 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 ICE2Q659A1 982 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 PLAG1Q6DJT9 500 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 CES3Q6UWW8 571 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 Q6ZPB1 254 aaPredicted RBP12.3□□□□□ -0.44
COPB1-209ENST00000533096 PEX26Q7Z412 305 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 ANKRD37Q7Z713 158 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 SDCCAG8Q86SQ7 713 aaPredicted RBP12.3□□□□□ -0.44
COPB1-209ENST00000533096 GHDCQ8N2G8 530 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 TMEM178AQ8NBL3 297 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 FAM98AQ8NCA5 519 aaKnown RBP12.3□□□□□ -0.44
COPB1-209ENST00000533096 MDS2Q8NDY4 140 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 SLC35B2Q8TB61 432 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 MCOLN3Q8TDD5 553 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 UCK2Q9BZX2 261 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 ENKD1Q9H0I2 346 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 SPATA7Q9P0W8 599 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 LRFN1Q9P244 771 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 CRYL1Q9Y2S2 319 aa12.3□□□□□ -0.44
COPB1-209ENST00000533096 EPN1Q9Y6I3 576 aaPredicted RBP12.3□□□□□ -0.44
COPB1-209ENST00000533096 F8P00451 2351 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 ERI2A8K979 691 aaKnown RBP12.29□□□□□ -0.44
COPB1-209ENST00000533096 ARHGEF33A8MVX0 844 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 SMAPO00193 183 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 NDC80O14777 642 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 HAT1O14929 419 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 CDC123O75794 336 aaPredicted RBP12.29□□□□□ -0.44
COPB1-209ENST00000533096 NMBRP28336 390 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 STIP1P31948 543 aaKnown RBP12.29□□□□□ -0.44
COPB1-209ENST00000533096 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
COPB1-209ENST00000533096 NSDHLQ15738 373 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 KLHL38Q2WGJ6 581 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 SFT2D3Q587I9 215 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 ACSBG2Q5FVE4 666 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 RNFT1Q5M7Z0 435 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 H3F3CQ6NXT2 135 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 PRSS41Q7RTY9 318 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 CCDC170Q8IYT3 715 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 CYP4X1Q8N118 509 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 HORMAD2Q8N7B1 307 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 UBL4BQ8N7F7 174 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 TC2NQ8N9U0 490 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 FRMD6Q96NE9 622 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 NPAS2Q99743 824 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 RBCK1Q9BYM8 510 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 RIMKLBQ9ULI2 386 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 FER1L5A0AVI2 2057 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
COPB1-209ENST00000533096 GRID2IPA4D2P6 1211 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 NKX2-6A6NCS4 301 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 FAM90A27PA6NNH2 459 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 E9PLN8 166 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 ADAM10O14672 748 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 CDC40O60508 579 aaKnown RBP eCLIP12.28□□□□□ -0.44
COPB1-209ENST00000533096 PDE9AO76083 593 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 CCNDBP1O95273 360 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 VAPBO95292 243 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 MATN4O95460 622 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 FTCDO95954 541 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 ZSCAN5DPP0CG00 497 aa12.28□□□□□ -0.44
COPB1-209ENST00000533096 CD99P14209 185 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms