RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 COL6A2P12110 1019 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NUDT1P36639 197 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ALDH3B2P48448 385 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 CRYBB1P53674 252 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 DRG2P55039 364 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 EEF1A1P68104 462 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 SPIBQ01892 262 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 EEF1A2Q05639 463 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 AIMP2Q13155 320 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 PEA15Q15121 130 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ATAT1Q5SQI0 421 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 EEF1A1P5Q5VTE0 462 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 WDR59Q6PJI9 974 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MRPL41Q8IXM3 137 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 UBR7Q8N806 425 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NAXEQ8NCW5 288 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ST7LQ8TDW4 575 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NRG4Q8WWG1 115 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 TAAR8Q969N4 342 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 PIWIL1Q96J94 861 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC39A8Q9C0K1 460 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MEAF6Q9HAF1 191 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 TRPV4Q9HBA0 871 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ERVK-5Q9HDB9 667 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 INIPQ9NRY2 104 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 TMEM248Q9NWD8 314 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MAGEL2Q9UJ55 1249 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ZNF175Q9Y473 711 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC28A1O00337 649 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 OR7A17O14581 309 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MEIS2O14770 477 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 HTRA2O43464 458 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 TLR5O60602 858 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC34A2O95436 690 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 S100A8P05109 93 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ASGR1P07306 291 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 LTA4HP09960 611 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ACSL1P33121 698 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 BUD31P41223 144 aaPredicted RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MASP1P48740 699 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 GLUD2P49448 558 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 TTPAP49638 278 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NAE1Q13564 534 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MPPE1Q53F39 396 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NKAPLQ5M9Q1 402 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ESRP1Q6NXG1 681 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 BEND5Q7L4P6 421 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 ADGRG6Q86SQ4 1221 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 TSPAN33Q86UF1 283 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 CUZD1Q86UP6 607 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 MAP4K3Q8IVH8 894 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 STAG3L4Q8TBR4 150 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 LRRN4Q8WUT4 740 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 METTL21AQ8WXB1 218 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 RAD9AQ99638 391 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NUDT16L1Q9BRJ7 211 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 LMAN2LQ9H0V9 348 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 KCNN2Q9H2S1 579 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 NARFLQ9H6Q4 476 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 FAM118AQ9NWS6 357 aa6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 AGO1Q9UL18 857 aaKnown RBP6.79□□□□□ -1.32
TGFBR3-210ENST00000533089 FGF19O95750 216 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 BMP6P22004 513 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 GLRA2P23416 452 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MSX1P28360 303 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC7A1P30825 629 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC5A2P31639 672 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TNFSF9P41273 254 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 BRCC3P46736 316 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 GCNT1Q02742 428 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 DUSP4Q13115 394 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 CRHR2Q13324 411 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SMAD4Q13485 552 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 UBXN2BQ14CS0 331 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 FLYWCH1Q4VC44 716 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PIWIL3Q7Z3Z3 882 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 NKAPQ8N5F7 415 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PTGR2Q8N8N7 351 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SLC41A3Q96GZ6 507 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 KCTD15Q96SI1 283 aaPredicted RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TTPALQ9BTX7 342 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ALG2Q9H553 416 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TMEM216Q9P0N5 145 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ANGPT4Q9Y264 503 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TLL2Q9Y6L7 1015 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 EPHX1P07099 455 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 LAG3P18627 525 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 TSPAN8P19075 237 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 ECHS1P30084 290 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PIGFQ07326 219 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 DPYSL3Q14195 570 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SF1Q15637 639 aaKnown RBP6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 MEP1AQ16819 746 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 PRAMEF13Q5VWM6 474 aa6.78□□□□□ -1.32
TGFBR3-210ENST00000533089 SCIMPQ6UWF3 145 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms