RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 COG4Q9H9E3 785 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 VPS37BQ9H9H4 285 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 GALPQ9UBC7 116 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 GNPTGQ9UJJ9 305 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 DNAJC16Q9Y2G8 782 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 CRYL1Q9Y2S2 319 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 PCDHB1Q9Y5F3 818 aa8.52□□□□□ -1.05
CCDC90B-217ENST00000530253 KLHL33A6NCF5 533 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 NEMP2A6NFY4 417 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 B4DGG1 531 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 H3BMM5 538 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PDPK1O15530 556 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 RIPK2O43353 540 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 KCNJ13O60928 360 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 H2AFYO75367 372 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 GPC4O75487 556 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 KCNK5O95279 499 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 ACSL3O95573 720 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 FTH1P02794 183 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 ANXA6P08133 673 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 MYF5P13349 255 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 FMO4P31512 558 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 CD151P48509 253 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PMS2P54278 862 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 NAB1Q13506 487 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PTRHD1Q6GMV3 140 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 ZCCHC8Q6NZY4 707 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 ABRAXAS1Q6UWZ7 409 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 WASH2PQ6VEQ5 465 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 NAPRTQ6XQN6 538 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 TRMT10CQ7L0Y3 403 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 STRA8Q7Z7C7 330 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 ZC3HC1Q86WB0 502 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 SFRP1Q8N474 314 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 ARL10Q8N8L6 244 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 KCNJ9Q92806 393 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 APOLD1Q96LR9 279 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 RMDN2Q96LZ7 410 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 NDNQ99608 321 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PARD6BQ9BYG5 372 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 OR52A5Q9H2C5 316 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 RHOJQ9H4E5 214 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PPANQ9NQ55 473 aaKnown RBP8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 WASH6PQ9NQA3 447 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PRDM8Q9NQV8 689 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 WDR37Q9Y2I8 494 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 PCNX2A6NKB5 2137 aa8.51□□□□□ -1.05
CCDC90B-217ENST00000530253 CABIN1Q9Y6J0 2220 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 SCDO00767 359 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 LIN7AO14910 233 aaPredicted RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PFDN6O15212 129 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 FAM155BO75949 473 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 TRIM16O95361 564 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 WISP3O95389 354 aaPredicted RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 TOP3BO95985 862 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 ALPPL2P10696 532 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 F3P13726 295 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 VCLP18206 1134 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 ITGB6P18564 788 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CSRP1P21291 193 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CD9P21926 228 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 IDSP22304 550 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 FDXRP22570 491 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 GCAP28676 217 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PDHA2P29803 388 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PHBP35232 272 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PTGS2P35354 604 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 GP5P40197 560 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CSRP3P50461 194 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 NOVA1P51513 510 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 LIMK2P53671 638 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CSE1LP55060 971 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CDKN2DP55273 166 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 MAZP56270 477 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 UBE2IP63279 158 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CLCA4Q14CN2 919 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 INAVAQ3KP66 663 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 C14orf28Q4W4Y0 310 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CAPRIN2Q6IMN6 1127 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 IYDQ6PHW0 289 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PCSK4Q6UW60 755 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 ZNF627Q7L945 461 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 GLRX5Q86SX6 157 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PIM3Q86V86 326 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 RASGRP3Q8IV61 690 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 VRK3Q8IV63 474 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PPM1NQ8N819 430 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 FAM46DQ8NEK8 389 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 DEFB124Q8NES8 71 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 GABPB2Q8TAK5 448 aaPredicted RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CD200R1Q8TD46 325 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 SLC37A2Q8TED4 501 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 ELMO1Q92556 727 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CDKL2Q92772 493 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CAVIN3Q969G5 261 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 GFM2Q969S9 779 aaKnown RBP8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 VPS39Q96JC1 886 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 PANX3Q96QZ0 392 aa8.5□□□□□ -1.05
CCDC90B-217ENST00000530253 CYTH2Q99418 400 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms