RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 WBP1Q96G27 269 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 CATSPER2Q96P56 530 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 C17orf62Q9BQA9 187 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 DHRS4Q9BTZ2 278 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 EPB41L4BQ9H329 900 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ALG9Q9H6U8 611 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 ANKZF1Q9H8Y5 726 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 NDOR1Q9UHB4 597 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 RNF112Q9ULX5 631 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 SLC22A14Q9Y267 594 aa12.1□□□□□ -0.47
CCDC90B-216ENST00000529856 A0A096LPK6 155 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 EXOC1LA0A1B0GW35 172 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 FEZF1A0PJY2 475 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 CCDC189A1A4V9 331 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 C9J4A7 227 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 TAPBPO15533 448 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 LCMT2O60294 686 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 KLHL2O95198 593 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 SLU7O95391 586 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 MED26O95402 600 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 CD63P08962 238 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 FURINP09958 794 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 GCAP28676 217 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 GRK3P35626 688 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 GDF5P43026 501 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 MAGEA12P43365 314 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 IRF9Q00978 393 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 SLC29A2Q14542 456 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 NCF4Q15080 339 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 TBR1Q16650 682 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 FAM83EQ2M2I3 478 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 HKDC1Q2TB90 917 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 LINC00303Q3SY05 128 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 CATSPEREQ5SY80 951 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 MLIPQ5VWP3 458 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 MRPL14Q6P1L8 145 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 PCSK4Q6UW60 755 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 TAOK1Q7L7X3 1001 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 ARHGEF39Q8N4T4 335 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 PDPRQ8NCN5 879 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 SLC5A11Q8WWX8 675 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 NEIL2Q969S2 332 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 ATOH8Q96SQ7 321 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 SARGQ9BW04 601 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 CD274Q9NZQ7 290 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 IFT80Q9P2H3 777 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 GPN3Q9UHW5 284 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 PTBP2Q9UKA9 531 aaKnown RBP12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 TCFL5Q9UL49 500 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 DYRK1BQ9Y463 629 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 KCNE2Q9Y6J6 123 aa12.09□□□□□ -0.47
CCDC90B-216ENST00000529856 CCDC88CQ9P219 2028 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 KERAO60938 352 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 KLF7O75840 302 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 IPO13O94829 963 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 WDR47O94967 919 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 S100BP04271 92 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 PIM1P11309 404 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 BCL6P41182 706 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 NFKB2Q00653 900 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 MEF2AQ02078 507 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 ACAP2Q15057 778 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 UGT8Q16880 541 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 GARNL3Q5VVW2 1013 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 PRMT9Q6P2P2 845 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 NXPE4Q6UWF7 544 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 OVCH1Q7RTY7 1134 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 VN1R4Q7Z5H5 301 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 MFSD9Q8NBP5 474 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 LSM14AQ8ND56 463 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 RHEBL1Q8TAI7 183 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 EXTL1Q92935 676 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 TM4SF19Q96DZ7 209 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 CABS1Q96KC9 395 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 C10orf90Q96M02 699 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 TSNARE1Q96NA8 513 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 GPR78Q96P69 363 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 BBC3Q96PG8 261 aaPredicted RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 TMEM79Q9BSE2 394 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 CAPS2Q9BXY5 557 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 VPS11Q9H270 941 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 CNOT10Q9H9A5 744 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 PELI2Q9HAT8 420 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 WWOXQ9NZC7 414 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 FETUBQ9UGM5 382 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 RUVBL1Q9Y265 456 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 PADI2Q9Y2J8 665 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 ZFYVE26Q68DK2 2539 aa12.08□□□□□ -0.48
CCDC90B-216ENST00000529856 FAM208BQ5VWN6 2430 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms