RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 PANX3Q96QZ0 392 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 CHP1Q99653 195 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 ZNF559Q9BR84 538 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 DRC3Q9H069 523 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 GOLPH3Q9H4A6 298 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 SPATA7Q9P0W8 599 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 RUVBL1Q9Y265 456 aaKnown RBP8.51□□□□□ -1.05
VPS11-203ENST00000529545 NAV3Q8IVL0 2385 aa8.51□□□□□ -1.05
VPS11-203ENST00000529545 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 GTF3C1Q12789 2109 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 A0A0A6YYC8 382 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 FAM221AA4D161 298 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 ASPDHA6ND91 283 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 IQCF5A8MTL0 148 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 I3L1I5 382 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 PJA2O43164 708 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 FAM155BO75949 473 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 TJP3O95049 919 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 C1orf105O95561 183 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 GOT2P00505 430 aaKnown RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 PSMA3P25788 255 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 RPA3P35244 121 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 CD96P40200 585 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 BDKRB1P46663 353 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 HADHBP55084 474 aaKnown RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 TAS2R50P59544 299 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 PPP2R2AP63151 447 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 PRAMEP78395 509 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 TSTA3Q13630 321 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 EXT1Q16394 746 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 MAPKAPK3Q16644 382 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 MINDY4Q4G0A6 757 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 CCDC38Q502W7 563 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 KCTD11Q693B1 232 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 TMEM211Q6ICI0 200 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 SPINK14Q6IE38 97 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 SLC25A25Q6KCM7 469 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 C3P1Q6ZMU1 363 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 NCCRP1Q6ZVX7 275 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 OTOAQ7RTW8 1153 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 GALNTL5Q7Z4T8 443 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 DOLPP1Q86YN1 238 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 ZC3H7AQ8IWR0 971 aaKnown RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 KLHDC8BQ8IXV7 354 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 SLC5A8Q8N695 610 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 ACBD4Q8NC06 268 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 MDS2Q8NDY4 140 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 MCOLN3Q8TDD5 553 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 SCMH1Q96GD3 660 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 FRMD6Q96NE9 622 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 SIGLEC12Q96PQ1 595 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 DMRTA2Q96SC8 542 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 SCN2AQ99250 2005 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 CYTH2Q99418 400 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 FAM118BQ9BPY3 351 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 TREX2Q9BQ50 279 aaPredicted RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 OCSTAMPQ9BR26 566 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 ACAT2Q9BWD1 397 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 OSBPL8Q9BZF1 889 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 MRPS30Q9NP92 439 aaKnown RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 ABHD10Q9NUJ1 306 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 PIH1D1Q9NWS0 290 aaKnown RBP8.5□□□□□ -1.05
VPS11-203ENST00000529545 ANKRD10Q9NXR5 420 aa8.5□□□□□ -1.05
VPS11-203ENST00000529545 NIPBLQ6KC79 2804 aaeCLIP8.49□□□□□ -1.05
VPS11-203ENST00000529545 IGHV3-20A0A0C4DH32 117 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 GOLGA6L9A6NEM1 432 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 SOWAHDA6NJG2 315 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 USP27XA6NNY8 438 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 GABRR3A8MPY1 467 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 CDK2AP1O14519 115 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 PRMT5O14744 637 aaPredicted RBP8.49□□□□□ -1.05
VPS11-203ENST00000529545 CBFA2T2O43439 604 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 NRP2O60462 931 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 ZWINTO95229 277 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 CCNDBP1O95273 360 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 SP1P08047 785 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 DRD2P14416 443 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 EZRP15311 586 aaKnown RBP8.49□□□□□ -1.05
VPS11-203ENST00000529545 ZNF24P17028 368 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 MAGEA1P43355 309 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 TTPAP49638 278 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 AGTR2P50052 363 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 MAT1AQ00266 395 aaKnown RBP8.49□□□□□ -1.05
VPS11-203ENST00000529545 ACTN3Q08043 901 aaPredicted RBP8.49□□□□□ -1.05
VPS11-203ENST00000529545 CDH17Q12864 832 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 MYBPHQ13203 477 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 FAM53BQ14153 422 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 FASTKQ14296 549 aaKnown RBP8.49□□□□□ -1.05
VPS11-203ENST00000529545 SYT16Q17RD7 645 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 HKDC1Q2TB90 917 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 C11orf63Q6NUN7 778 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 H3F3CQ6NXT2 135 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 CAVIN1Q6NZI2 390 aaKnown RBP8.49□□□□□ -1.05
VPS11-203ENST00000529545 PPP1R21Q6ZMI0 780 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 CRLF3Q8IUI8 442 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 SIAH3Q8IW03 269 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 KRT222Q8N1A0 295 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
VPS11-203ENST00000529545 M1APQ8TC57 530 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms