RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 FAM118BQ9BPY3 351 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 SYNPO2LQ9H987 977 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 MMP25Q9NPA2 562 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 ABHD10Q9NUJ1 306 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 UTP6Q9NYH9 597 aaKnown RBP11.61□□□□□ -0.55
SRPRA-202ENST00000527817 KCNN3Q9UGI6 736 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 SLC2A6Q9UGQ3 507 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 PCDHA3Q9Y5H8 950 aa11.61□□□□□ -0.55
SRPRA-202ENST00000527817 IGHV3-20A0A0C4DH32 117 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 IGKV1-8A0A0C4DH67 115 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 MACROD2A1Z1Q3 448 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 H0YIG0 161 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 GOLGA6L19H0YKK7 550 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 NEURL1O76050 574 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 TOXO94900 526 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 TJP3O95049 919 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 HOXD4P09016 255 aaPredicted RBP11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ERGP11308 486 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ADRA1DP25100 572 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 BDKRB1P46663 353 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 AVPR1BP47901 424 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 AGTR2P50052 363 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 MAT1AQ00266 395 aaKnown RBP11.6□□□□□ -0.55
SRPRA-202ENST00000527817 HSF1Q00613 529 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 PRDX1Q06830 199 aaKnown RBP11.6□□□□□ -0.55
SRPRA-202ENST00000527817 TFF3Q07654 80 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 CDH17Q12864 832 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 PTK6Q13882 451 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 SEMA3AQ14563 771 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 NDUFA9Q16795 377 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 P3H1Q32P28 736 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ZNF425Q6IV72 752 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 LANCL3Q6ZV70 420 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ANKRD37Q7Z713 158 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 PCGF5Q86SE9 256 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 LGI4Q8N135 537 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 OR52K1Q8NGK4 314 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 SMPDL3AQ92484 453 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 RERGQ96A58 199 aaPredicted RBP11.6□□□□□ -0.55
SRPRA-202ENST00000527817 PANX3Q96QZ0 392 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ZNF559Q9BR84 538 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ACAT2Q9BWD1 397 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 KCNJ16Q9NPI9 418 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 ANAPC5Q9UJX4 755 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 VPS13CQ709C8 3753 aa11.6□□□□□ -0.55
SRPRA-202ENST00000527817 FBN3Q75N90 2809 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 A0A0U1RQJ8 604 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 ERI2A8K979 691 aaKnown RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 GABRR3A8MPY1 467 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 MAN1A2O60476 641 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 MATN4O95460 622 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 GAS8O95995 478 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 EZRP15311 586 aaKnown RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 KLK2P20151 261 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 MSX1P28360 303 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 CHRNB4P30926 498 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 CTNNA1P35221 906 aaKnown RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 CETN2P41208 172 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 MAGEA1P43355 309 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 OC90Q02509 493 aaPredicted RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 ARHGAP19Q14CB8 494 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 MAPKAPK3Q16644 382 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 AARS2Q5JTZ9 985 aaKnown RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 RNFT1Q5M7Z0 435 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 PTRHD1Q6GMV3 140 aaKnown RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 FAM71DQ8N9W8 422 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 OR9A1PQ8NGU1 263 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 FAM57AQ8TBR7 257 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 SKA2Q8WVK7 121 aaPredicted RBP11.59□□□□□ -0.55
SRPRA-202ENST00000527817 PEX13Q92968 403 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 NINJ1Q92982 152 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 ZNF778Q96MU6 729 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 P2RY12Q9H244 342 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 LRFN1Q9P244 771 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 HRH3Q9Y5N1 445 aa11.59□□□□□ -0.55
SRPRA-202ENST00000527817 NME2P1O60361 137 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 NSA2O95478 260 aaKnown RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 TPM1P09493 284 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 FOSL1P15407 271 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 ZNF24P17028 368 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 NME2P22392 152 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 RPS3P23396 243 aaKnown RBP eCLIP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 RPA3P35244 121 aaPredicted RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 PTGS2P35354 604 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 HSD17B2P37059 387 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 TTPAP49638 278 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 ST13P50502 369 aaKnown RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 PRAMEP78395 509 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 FOLH1Q04609 750 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 MINDY4Q4G0A6 757 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 ANKRD20A4Q4UJ75 823 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 ICE2Q659A1 982 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.56
SRPRA-202ENST00000527817 SUSD1Q6UWL2 747 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 CEP128Q6ZU80 1094 aa11.58□□□□□ -0.56
SRPRA-202ENST00000527817 OTOAQ7RTW8 1153 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms