RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FLOT2Q14254 428 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KCNJ12Q14500 433 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF267Q14586 743 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RAB39AQ14964 217 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PON3Q15166 354 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RPS6KA1Q15418 735 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TAB1Q15750 504 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 STXBP2Q15833 593 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 DUSP6Q16828 381 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 AP5B1Q2VPB7 878 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 GPR33Q49SQ1 333 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 LRRC24Q50LG9 513 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 HSD17B12Q53GQ0 312 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KRTCAP3Q53RY4 240 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 Q5BKY6 102 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 FSCBQ5H9T9 825 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KIAA1755Q5JYT7 1200 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RABGAP1LQ5R372 815 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CCNYL2Q5T2Q4 361 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 GPR107Q5VW38 600 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TIGD3Q6B0B8 471 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 AWAT2Q6E213 333 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 IL31Q6EBC2 164 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PAPD4Q6PIY7 484 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZDHHC24Q6UX98 284 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 VITQ6UXI7 678 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TMEM26Q6ZUK4 368 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RRM2BQ7LG56 351 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 OTOAQ7RTW8 1153 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 LUZP2Q86TE4 346 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NT5DC3Q86UY8 548 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 AMIGO1Q86WK6 493 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CATSPER3Q86XQ3 398 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KRT73Q86Y46 540 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NUDCD3Q8IVD9 361 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PHC2Q8IXK0 858 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TCTE3Q8IZS6 198 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RBFAQ8N0V3 343 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CBARPQ8N350 705 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ATG16L2Q8NAA4 619 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 BEST2Q8NFU1 509 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 OR56B2PQ8NGI1 322 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 OR13F1Q8NGS4 319 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RP9Q8TA86 221 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RNASE11Q8TAA1 199 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PSMA8Q8TAA3 256 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PHF10Q8WUB8 498 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 DNAJA4Q8WW22 397 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PYDC1Q8WXC3 89 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ELMO1Q92556 727 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 USP13Q92995 863 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ELP4Q96EB1 424 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MTMR8Q96EF0 704 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MAGED4Q96JG8 741 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 VCPIP1Q96JH7 1222 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF668Q96K58 619 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF597Q96LX8 424 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PPP3R2Q96LZ3 170 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NSMCE2Q96MF7 247 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ZNF558Q96NG5 402 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 KLHL32Q96NJ5 620 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ERGIC2Q96RQ1 377 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 EYA3Q99504 573 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NPAS1Q99742 590 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 THTPAQ9BU02 230 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC25A23Q9BV35 468 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ANKRD60Q9BZ19 345 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 FRMD8P1Q9BZ68 369 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SHARPINQ9H0F6 387 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 OR51V1Q9H2C8 321 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MMP27Q9H306 513 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CATSPERBQ9H7T0 1116 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MINDY3Q9H8M7 445 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 BIN3Q9NQY0 253 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 ABCC13Q9NSE7 274 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CCM2LQ9NUG4 571 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SETD4Q9NVD3 440 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 DNAJC11Q9NVH1 559 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 INTS10Q9NVR2 710 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 TAB2Q9NYJ8 693 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NKIRAS2Q9NYR9 191 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CD274Q9NZQ7 290 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 BFARQ9NZS9 450 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 COX16Q9P0S2 106 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PSMC3IPQ9P2W1 217 aaPredicted RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 COPG2Q9UBF2 871 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 HEY2Q9UBP5 337 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 POLLQ9UGP5 575 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 NDRG3Q9UGV2 375 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SLC23A1Q9UHI7 598 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 RIMS3Q9UJD0 308 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 MID2Q9UJV3 735 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CDH9Q9ULB4 789 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PLCL2Q9UPR0 1127 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 CRYL1Q9Y2S2 319 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PCDHGB5Q9Y5G0 923 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 COPG1Q9Y678 874 aaKnown RBP3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 FKBP7Q9Y680 259 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 PFASO15067 1338 aa3.6□□□□□ -1.83
CLNS1A-209ENST00000527299 SIPA1L1O43166 1804 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms