RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 COILP38432 576 aaPredicted RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 KCNJ1P48048 391 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 NUMBP49757 651 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SLC37A1P57057 533 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 RPL15P61313 204 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 ST8SIA6P61647 398 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 TUBB4BP68371 445 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 PPIDQ08752 370 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 GALNT1Q10472 559 aaPredicted RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 GRSF1Q12849 480 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP48-211ENST00000526044 PRKG2Q13237 762 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 HNRNPDQ14103 355 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 RFTN1Q14699 578 aaPredicted RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 PON2Q15165 354 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CYTH1Q15438 398 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 TEX44Q53QW1 395 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 LIPMQ5VYY2 423 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 FAAH2Q6GMR7 532 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 TMEM88Q6PEY1 159 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CCDC137Q6PK04 289 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 ZNF852Q6ZMS4 543 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 LEKR1Q6ZMV7 388 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 ADIPOR2Q86V24 386 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CDKL3Q8IVW4 592 aaPredicted RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 KLHL7Q8IXQ5 586 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 BBS5Q8N3I7 341 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 TEX26Q8N6G2 289 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 LSMEM1Q8N8F7 131 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 FAM47BQ8NA70 645 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 ATG16L2Q8NAA4 619 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 GRK7Q8WTQ7 553 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 HTR3CQ8WXA8 447 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 FAM3CQ92520 227 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 MSANTD3Q96H12 275 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 UBXN10Q96LJ8 280 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CCDC114Q96M63 670 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 ZNF599Q96NL3 588 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 OLFM3Q96PB7 478 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 VAT1Q99536 393 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 RTKNQ9BST9 563 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 TMEM121Q9BTD3 319 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 TUBB6Q9BUF5 446 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 ABHD14AQ9BUJ0 271 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SCNM1Q9BWG6 230 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CARD6Q9BX69 1037 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 DDX47Q9H0S4 455 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 C10orf88Q9H8K7 445 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 FBRSL1Q9HCM7 1045 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 ITM2CQ9NQX7 267 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 HAUS2Q9NVX0 235 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 RBM22Q9NW64 420 aaKnown RBP eCLIP4.43□□□□□ -1.72e-10■■■□□ 17
USP48-211ENST00000526044 TMEM45AQ9NWC5 275 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SEPT10Q9P0V9 454 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 UBA2Q9UBT2 640 aaPredicted RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 SUN2Q9UH99 717 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 PCYOX1Q9UHG3 505 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SLC25A13Q9UJS0 675 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 INTS6Q9UL03 887 aaKnown RBP4.43□□□□□ -1.7
USP48-211ENST00000526044 RAB21Q9UL25 225 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 SLC8A2Q9UPR5 921 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 ERVW-1Q9UQF0 538 aa4.43□□□□□ -1.7
USP48-211ENST00000526044 CDH23Q9H251 3354 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3DA0A087WVF3 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3IA0A087WXS9 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3EA0A087X179 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3KA0A087X1G2 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FAM90A18PA6NE21 464 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3FA6NER0 549 aaPredicted RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 FAM90A16PA6NEW6 464 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 C5orf60A6NFR6 353 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FAM90A9PA6NNJ1 464 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 EFCAB8A8MWE9 144 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FAM90A5PA8MXJ8 464 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 B9A039 149 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3LB9A6J9 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 K7EQS6 105 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 K7ERQ8 282 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KCNK1O00180 336 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 SOCS2O14508 198 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 PLOD3O60568 738 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ACTL6BO94805 426 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 SLU7O95391 586 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 GAS8O95995 478 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 EGFP01133 1207 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 IFNB1P01574 187 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 KRT14P02533 472 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 ALDOAP04075 364 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 CSTBP04080 98 aaKnown RBP4.42□□□□□ -1.7
USP48-211ENST00000526044 FAM90A15PP0C7V4 464 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FAM90A14PP0C7W9 464 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 TBC1D3HP0C7X1 549 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 PRF1P14222 555 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 IGFBP2P18065 325 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 CD72P21854 359 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 NR4A2P43354 598 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FNTAP49354 379 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 FOXL2P58012 376 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 STARD6P59095 220 aa4.42□□□□□ -1.7
USP48-211ENST00000526044 IFI35P80217 286 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms