RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 NKAPQ8N5F7 415 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 STT3BQ8TCJ2 826 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 FBXL8Q96CD0 374 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 MMABQ96EY8 250 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 OR4K3Q96R72 315 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 MESP1Q9BRJ9 268 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 EPN3Q9H201 632 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 SLC26A1Q9H2B4 701 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 WDR54Q9H977 334 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 TXNDC16Q9P2K2 825 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 TRPC4Q9UBN4 977 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 FASNP49327 2511 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 BAHCC1Q9P281 2608 aa12.23□□□□□ -0.45
TRAPPC4-205ENST00000525079 VSTM2BA6NLU5 285 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 PHGDHO43175 533 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 FOXS1O43638 330 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 CEACAM4O75871 244 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 C1QAP02745 245 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 ENO2P09104 434 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 GSTA2P09210 222 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZGLP1P0C6A0 271 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 MMP11P24347 488 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 CCND1P24385 295 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 HRH2P25021 359 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 GMPRP36959 345 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 BCL6P41182 706 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 EMP3P54852 163 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 RPS15AP62244 130 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 MAT1AQ00266 395 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 POU4F1Q01851 419 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 GUCY2DQ02846 1103 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 RELAQ04206 551 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 OCA2Q04671 838 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 KLC1Q07866 573 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 USP10Q14694 798 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 EFTUD2Q15029 972 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 TSNQ15631 228 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 PPP1R3AQ16821 1122 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 SYT16Q17RD7 645 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 C18orf21Q32NC0 220 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 KBTBD12Q3ZCT8 623 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 CATSPEREQ5SY80 951 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 VN1R4Q7Z5H5 301 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 LAPTM4BQ86VI4 370 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 PPM1NQ8N819 430 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 OR56A3Q8NH54 315 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 FBF1Q8TES7 1133 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 MIEF2Q96C03 454 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 FER1L6-AS2Q96M78 137 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 IP6K3Q96PC2 410 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 RBBP8Q99708 897 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 CPNE1Q99829 537 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 EGFL8Q99944 293 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 LRRC4CQ9HCJ2 640 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 CTNNAL1Q9UBT7 734 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZNF282Q9UDV7 671 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 ANAPC2Q9UJX6 822 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 CDC14AQ9UNH5 594 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 NOVA2Q9UNW9 492 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 PCDHGA9Q9Y5G4 932 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 BOD1L1Q8NFC6 3051 aa12.22□□□□□ -0.45
TRAPPC4-205ENST00000525079 NCF1BA6NI72 391 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 NCF1CA8MVU1 366 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 AGPSO00116 658 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 TXNDC9O14530 226 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 SOCS6O14544 535 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 NCF1P14598 390 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 GP5P40197 560 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 CASRP41180 1078 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 IGFBP7Q16270 282 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 RBBP7Q16576 425 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 NADK2Q4G0N4 442 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 FAAH2Q6GMR7 532 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 KIRREL2Q6UWL6 708 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 CYS1Q717R9 158 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 PRSS41Q7RTY9 318 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 THOC6Q86W42 341 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 SHISA5Q8N114 240 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 ARHGEF39Q8N4T4 335 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 AMER3Q8N944 861 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 CLEC1AQ8NC01 280 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 KCT2Q8NC54 265 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 NOA1Q8NC60 698 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 OR9A4Q8NGU2 314 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZCCHC10Q8TBK6 192 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 ATL1Q8WXF7 558 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 MRRFQ96E11 262 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 TSNARE1Q96NA8 513 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 HAUS8Q9BT25 410 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 CRB3Q9BUF7 120 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 DRC3Q9H069 523 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 MLXIPLQ9NP71 852 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 ZDHHC18Q9NUE0 388 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 GPR83Q9NYM4 423 aa12.21□□□□□ -0.45
TRAPPC4-205ENST00000525079 FBXL4Q9UKA2 621 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms