RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 DRC3Q9H069 523 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 ARL15Q9NXU5 204 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 MAP10Q9P2G4 905 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 C3orf18Q9UK00 162 aa17.66■□□□□ 0.42
CAPN1-203ENST00000525013 NDC80O14777 642 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 VPS4BO75351 444 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 SORBS2O94875 1100 aaKnown RBP17.65■□□□□ 0.42
CAPN1-203ENST00000525013 FDXRP22570 491 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 CD97P48960 835 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 SOX8P57073 446 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 FASTKD3Q14CZ7 662 aaKnown RBP17.65■□□□□ 0.42
CAPN1-203ENST00000525013 FAM45BPQ6NSW5 357 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 PARP9Q8IXQ6 854 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 FAM45AQ8TCE6 357 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 PNPLA2Q96AD5 504 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 OLFM1Q99784 485 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 ZNF552Q9H707 407 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-203ENST00000525013 VPS4AQ9UN37 437 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 SH2B3Q9UQQ2 575 aa17.65■□□□□ 0.42
CAPN1-203ENST00000525013 A0A0A6YYC8 382 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-203ENST00000525013 I3L1I5 382 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-203ENST00000525013 TP73O15350 636 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 IPO13O94829 963 aaKnown RBP17.64■□□□□ 0.41
CAPN1-203ENST00000525013 TSPAN12O95859 305 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 ACPPP15309 386 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 CCND1P24385 295 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 RPS15AP62244 130 aaKnown RBP17.64■□□□□ 0.41
CAPN1-203ENST00000525013 FRG1Q14331 258 aaKnown RBP17.64■□□□□ 0.41
CAPN1-203ENST00000525013 NDUFA9Q16795 377 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 CAPN12Q6ZSI9 719 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 STRA8Q7Z7C7 330 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 LAPTM4BQ86VI4 370 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 ZBED8Q8IZ13 594 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 BBOF1Q8ND07 529 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 OR11G2Q8NGC1 345 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 TM9SF4Q92544 642 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 MESP1Q9BRJ9 268 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 DPH5Q9H2P9 285 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 PSAT1Q9Y617 370 aa17.64■□□□□ 0.41
CAPN1-203ENST00000525013 USP9XQ93008 2570 aaPredicted RBP17.64■□□□□ 0.41
CAPN1-203ENST00000525013 IGLV3-12A0A075B6K2 115 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 MAP2K7O14733 419 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 FOXS1O43638 330 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 GUCA1CO95843 209 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 CDH1P12830 882 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 CASQ1P31415 396 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 SLC26A3P40879 764 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 AVPR1BP47901 424 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 EMP2P54851 167 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 CSNK1G2P78368 415 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 CALCOCO2Q13137 446 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 INPP5JQ15735 1006 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 PLEKHN1Q494U1 663 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 PRR30Q53SZ7 412 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 CAPN13Q6MZZ7 669 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 MAATS1Q7Z4T9 603 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 C17orf53Q8N3J3 647 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 ZADH2Q8N4Q0 377 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 AMER3Q8N944 861 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 Q8NA96 180 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 SPATA4Q8NEY3 305 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 PYCR2Q96C36 320 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 C8orf44Q96CB5 159 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 MACROD1Q9BQ69 325 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 ERP44Q9BS26 406 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 SGPP1Q9BX95 441 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 MKKSQ9NPJ1 570 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 B3GNT3Q9Y2A9 372 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 MAP4K5Q9Y4K4 846 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.63■□□□□ 0.41
CAPN1-203ENST00000525013 SCN2AQ99250 2005 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 RELNP78509 3460 aa17.63■□□□□ 0.41
CAPN1-203ENST00000525013 FEZF1A0PJY2 475 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 FAM187AA6NFU0 413 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 IDSB3KWA1 339 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 E7ESA3 106 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 HEXBP07686 556 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 CXCR2P25025 360 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 GRK3P35626 688 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 AP1S2P56377 157 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 FAM53BQ14153 422 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 UBAP2LQ14157 1087 aaKnown RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 SYT16Q17RD7 645 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 AGAP7PQ5VUJ5 663 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 DUPD1Q68J44 220 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 FAAH2Q6GMR7 532 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 LCTLQ6UWM7 567 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 IGFL3Q6UXB1 125 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 VN1R4Q7Z5H5 301 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 ZC3HC1Q86WB0 502 aaKnown RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 ARHGEF39Q8N4T4 335 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 OR9A4Q8NGU2 314 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 PYROXD1Q8WU10 500 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 THAP11Q96EK4 314 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 THOC3Q96J01 351 aaKnown RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 AGAP4Q96P64 663 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 HAUS8Q9BT25 410 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 LHPPQ9H008 270 aa17.62■□□□□ 0.41
CAPN1-203ENST00000525013 ILKAPQ9H0C8 392 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-203ENST00000525013 ZBTB20Q9HC78 741 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms