RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ASB5Q8WWX0 329 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 MR1Q95460 341 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 C3orf49Q96BT1 292 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 SAAL1Q96ER3 474 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 ALG14Q96F25 216 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 ZNF503Q96F45 646 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 VPS50Q96JG6 964 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 MAGED4Q96JG8 741 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 UBXN10Q96LJ8 280 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 C9orf72Q96LT7 481 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 GBP5Q96PP8 586 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 WDR24Q96S15 920 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 ST6GALNAC4Q9H4F1 302 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 SMYD3Q9H7B4 428 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 PARVGQ9HBI0 331 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 KCNJ16Q9NPI9 418 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 TRIM36Q9NQ86 728 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 WASH6PQ9NQA3 447 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 FAM49BQ9NUQ9 324 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 ING1Q9UK53 422 aaPredicted RBP6.67□□□□□ -1.34
NEDD8-203ENST00000524927 OR1A2Q9Y585 309 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 TENM1Q9UKZ4 2725 aa6.67□□□□□ -1.34
NEDD8-203ENST00000524927 CHD5Q8TDI0 1954 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 TRIM64A6NGJ6 449 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 TRIM64BA6NI03 449 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 VWC2LB2RUY7 222 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 CACNB4O00305 520 aaPredicted RBP6.66□□□□□ -1.34
NEDD8-203ENST00000524927 CPLX1O14810 134 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 C9P02748 559 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 GKP32189 559 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 MCM7P33993 719 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 NUMBP49757 651 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 TPTEP56180 551 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 EVCP57679 992 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
NEDD8-203ENST00000524927 KLF10Q13118 480 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 ORC2Q13416 577 aaPredicted RBP6.66□□□□□ -1.34
NEDD8-203ENST00000524927 CUL4BQ13620 913 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 KRT32Q14532 448 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 KLHL40Q2TBA0 621 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 WSCD2Q2TBF2 565 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 AGAP7PQ5VUJ5 663 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 KAZNQ674X7 775 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 PM20D1Q6GTS8 502 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 PWWP2BQ6NUJ5 590 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 CPLX2Q6PUV4 134 aaKnown RBP6.66□□□□□ -1.34
NEDD8-203ENST00000524927 DPY19L3Q6ZPD9 716 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 UNC93AQ86WB7 457 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 CHD1LQ86WJ1 897 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 C12orf29Q8N999 325 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 PBKQ96KB5 322 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 AGAP4Q96P64 663 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 FIZ1Q96SL8 496 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 UBXN6Q9BZV1 441 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 TRNAU1APQ9NX07 287 aaKnown RBP6.66□□□□□ -1.34
NEDD8-203ENST00000524927 SH2B3Q9UQQ2 575 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 ITM2BQ9Y287 266 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 L3MBTL1Q9Y468 752 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 ARID1AO14497 2285 aa6.66□□□□□ -1.34
NEDD8-203ENST00000524927 DYSFO75923 2080 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 NKX2-6A6NCS4 301 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 C16orf96A6NNT2 1141 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 EFCAB8A8MWE9 144 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 AP4M1O00189 453 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CYR61O00622 381 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 PEX12O00623 359 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CES2O00748 559 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 MPPED1O15442 326 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 KLK8O60259 260 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 PYGLP06737 847 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 KLK3P07288 261 aaPredicted RBP6.65□□□□□ -1.34
NEDD8-203ENST00000524927 HOXC4P09017 264 aaPredicted RBP6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CREB1P16220 341 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CD53P19397 219 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 HADHAP40939 763 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CXCR3P49682 368 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 PRKAA2P54646 552 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 BLOC1S1P78537 153 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 PLAC9Q5JTB6 97 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 ZNF569Q5MCW4 686 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.65□□□□□ -1.34
NEDD8-203ENST00000524927 PRAMEF17Q5VTA0 474 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 KRT79Q5XKE5 535 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 Q6ZNX1 250 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 SIRT6Q8N6T7 355 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 OR6Y1Q8NGX8 325 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 CXorf40AQ8TE69 158 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 SYAP1Q96A49 352 aaPredicted RBP6.65□□□□□ -1.34
NEDD8-203ENST00000524927 LRFN5Q96NI6 719 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 DUSP16Q9BY84 665 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 AGXT2Q9BYV1 514 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 RAB34Q9BZG1 259 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 VPS16Q9H269 839 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.65□□□□□ -1.34
NEDD8-203ENST00000524927 RARRES3Q9UL19 164 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 NFU1Q9UMS0 254 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 DAPP1Q9UN19 280 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 OR51B4Q9Y5P0 310 aa6.65□□□□□ -1.34
NEDD8-203ENST00000524927 A6NNC1 897 aa6.64□□□□□ -1.35
NEDD8-203ENST00000524927 B9A039 149 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms