RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SEMA3AQ14563 771 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 SKOR2Q2VWA4 1001 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 PRTGQ2VWP7 1150 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 PLAG1Q6DJT9 500 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 PTRHD1Q6GMV3 140 aaKnown RBP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 PRSS41Q7RTY9 318 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 ANKRD37Q7Z713 158 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 RCOR2Q8IZ40 523 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 FAM57AQ8TBR7 257 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 ASB5Q8WWX0 329 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 RND1Q92730 232 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 SPATA13Q96N96 652 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 TTC1Q99614 292 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 CHP1Q99653 195 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 MACROD1Q9BQ69 325 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 BPIFA3Q9BQP9 254 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 GPATCH1Q9BRR8 931 aaKnown RBP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 TSSK1BQ9BXA7 367 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 RAB11FIP5Q9BXF6 653 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 IFNKQ9P0W0 207 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 C19orf25Q9UFG5 118 aaPredicted RBP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.97□□□□□ -0.65
SDCBP-211ENST00000523441 ALG6Q9Y672 507 aa10.97□□□□□ -0.65
SDCBP-211ENST00000523441 HRNRQ86YZ3 2850 aaPredicted RBP10.96□□□□□ -0.65
SDCBP-211ENST00000523441 A0A1W2PPV9 198 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 A0A1W2PQ72 361 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 OR2A25A4D2G3 310 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 SOWAHDA6NJG2 315 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 F8W8V4 182 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 APOC4-APOC2K7ER74 178 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 NEURL1O76050 574 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 APOC2P02655 101 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 IGFBP2P18065 325 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 DNASE1P24855 282 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 CHRNB4P30926 498 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 XCR1P46094 333 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 MEOX1P50221 254 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 NR0B1P51843 470 aaKnown RBP10.96□□□□□ -0.65
SDCBP-211ENST00000523441 TPM4P67936 248 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 FASTKD1Q53R41 847 aaKnown RBP10.96□□□□□ -0.65
SDCBP-211ENST00000523441 SFT2D3Q587I9 215 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 TMEM198Q66K66 360 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 PAPD4Q6PIY7 484 aaKnown RBP10.96□□□□□ -0.65
SDCBP-211ENST00000523441 BBS12Q6ZW61 710 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 LUZP1Q86V48 1076 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 CYP4X1Q8N118 509 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 KIF2BQ8N4N8 673 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 HORMAD2Q8N7B1 307 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 PPFIBP2Q8ND30 876 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 LRRN4CLQ8ND94 238 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 OR52K1Q8NGK4 314 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 LILRB4Q8NHJ6 448 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 ZCCHC10Q8TBK6 192 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 KRT35Q92764 455 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 SEC16BQ96JE7 1060 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 TGIF2Q9GZN2 237 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 KCNN3Q9UGI6 736 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 TAC3Q9UHF0 121 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 FEZ2Q9UHY8 353 aaPredicted RBP10.96□□□□□ -0.65
SDCBP-211ENST00000523441 ST6GALNAC2Q9UJ37 374 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 TFR2Q9UP52 801 aa10.96□□□□□ -0.65
SDCBP-211ENST00000523441 PHF3Q92576 2039 aaKnown RBP10.96□□□□□ -0.66
SDCBP-211ENST00000523441 FAM237BA0A1B0GVD1 139 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 FAM221AA4D161 298 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 SGK494L7N484 410 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 SLC16A5O15375 505 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 PRMT3O60678 531 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 GPC4O75487 556 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 METTL18O95568 372 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 HOXD4P09016 255 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-211ENST00000523441 IL1RNP18510 177 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 AOAHP28039 575 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ADSLP30566 484 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ITGA8P53708 1063 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 NUP107P57740 925 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 TAS2R50P59544 299 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 GPR85P60893 370 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 TFF3Q07654 80 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ASTE1Q2TB18 679 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-211ENST00000523441 TMEM211Q6ICI0 200 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 AADACL2Q6P093 401 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 KATNAL2Q8IYT4 538 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 SLC5A8Q8N695 610 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 OTUD6BQ8N6M0 293 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 FAM71DQ8N9W8 422 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 OR5M9Q8NGP3 310 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 OR5M3Q8NGP4 307 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 OR4L1Q8NH43 312 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 OR51Q1Q8NH59 317 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 SREK1Q8WXA9 508 aaKnown RBP10.95□□□□□ -0.66
SDCBP-211ENST00000523441 RMND5BQ96G75 393 aaPredicted RBP10.95□□□□□ -0.66
SDCBP-211ENST00000523441 MDFIQ99750 246 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 CARD6Q9BX69 1037 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 DEFB127Q9H1M4 99 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 CXXC4Q9H2H0 198 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 LRRC40Q9H9A6 602 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ARNT2Q9HBZ2 717 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ZNF358Q9NW07 568 aa10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ZNHIT6Q9NWK9 470 aaKnown RBP10.95□□□□□ -0.66
SDCBP-211ENST00000523441 ANAPC5Q9UJX4 755 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms