RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 HIVEP1P15822 2718 aa24.54■■□□□ 1.52
PVT1-219ENST00000523427 OR2W5A6NFC9 320 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 ZNHIT1O43257 154 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 VAPBO95292 243 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 MATN4O95460 622 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 SYF2O95926 243 aaKnown RBP24.53■■□□□ 1.52
PVT1-219ENST00000523427 PTMSP20962 102 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 AVPR1BP47901 424 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 SNRPNP63162 240 aaKnown RBP24.53■■□□□ 1.52
PVT1-219ENST00000523427 CDSNQ15517 529 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 KLHL38Q2WGJ6 581 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 NCCRP1Q6ZVX7 275 aaPredicted RBP24.53■■□□□ 1.52
PVT1-219ENST00000523427 SPNS2Q8IVW8 549 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 OR9A4Q8NGU2 314 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 BIRC8Q96P09 236 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 VN1R1Q9GZP7 353 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 KCNK13Q9HB14 408 aa24.53■■□□□ 1.52
PVT1-219ENST00000523427 CPAMD8Q8IZJ3 1885 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 HAT1O14929 419 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 TTI1O43156 1089 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 PHF2O75151 1096 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 PKMP14618 531 aaKnown RBP24.52■■□□□ 1.52
PVT1-219ENST00000523427 PNLIPRP1P54315 467 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 KRTAP10-9P60411 292 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 PRDX1Q06830 199 aaKnown RBP24.52■■□□□ 1.52
PVT1-219ENST00000523427 ACER2Q5QJU3 275 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 THEMIS2Q5TEJ8 643 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 ZNF425Q6IV72 752 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 CPEB2Q7Z5Q1 589 aaKnown RBP24.52■■□□□ 1.52
PVT1-219ENST00000523427 SDCCAG8Q86SQ7 713 aaPredicted RBP24.52■■□□□ 1.52
PVT1-219ENST00000523427 MPP5Q8N3R9 675 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 MTFMTQ96DP5 389 aaKnown RBP24.52■■□□□ 1.52
PVT1-219ENST00000523427 CYTH2Q99418 400 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 PAK5Q9P286 719 aa24.52■■□□□ 1.52
PVT1-219ENST00000523427 NPIPA5E9PKD4 350 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 SMAPO00193 183 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 CCNDBP1O95273 360 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 ERGP11308 486 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 RPL22P35268 128 aaKnown RBP24.51■■□□□ 1.51
PVT1-219ENST00000523427 ALDH6A1Q02252 535 aaKnown RBP24.51■■□□□ 1.51
PVT1-219ENST00000523427 NDUFA9Q16795 377 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 SEL1L2Q5TEA6 688 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 ADAMTS18Q8TE60 1221 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 MFSD3Q96ES6 412 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 ZNF354BQ96LW1 612 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 SIGLEC12Q96PQ1 595 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 MACROD1Q9BQ69 325 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 FAM114A2Q9NRY5 505 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 HCN3Q9P1Z3 774 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 NPIPA1Q9UND3 350 aa24.51■■□□□ 1.51
PVT1-219ENST00000523427 MYO1CO00159 1063 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 TXNDC9O14530 226 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 CATP04040 527 aaKnown RBP24.5■■□□□ 1.51
PVT1-219ENST00000523427 EZRP15311 586 aaKnown RBP24.5■■□□□ 1.51
PVT1-219ENST00000523427 MGAT1P26572 445 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 KIR3DL1P43629 444 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 KIF5AQ12840 1032 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 TUBA3CQ13748 450 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 KCTD19Q17RG1 926 aaPredicted RBP24.5■■□□□ 1.51
PVT1-219ENST00000523427 SKOR2Q2VWA4 1001 aaPredicted RBP24.5■■□□□ 1.51
PVT1-219ENST00000523427 MRNIPQ6NTE8 343 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 TUBA3EQ6PEY2 450 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 PRSS41Q7RTY9 318 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 ARHGEF39Q8N4T4 335 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 LPGAT1Q92604 370 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 HES6Q96HZ4 224 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 BFARQ9NZS9 450 aa24.5■■□□□ 1.51
PVT1-219ENST00000523427 HEATR5BQ9P2D3 2071 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 E5RI56 91 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 H7BY64 318 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 PSIP1O75475 530 aaKnown RBP24.49■■□□□ 1.51
PVT1-219ENST00000523427 KRT38O76015 456 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 SLC16A8O95907 504 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 ARNTP27540 789 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 SSTR2P30874 369 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 TERF1P54274 439 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 BASP1P80723 227 aaKnown RBP24.49■■□□□ 1.51
PVT1-219ENST00000523427 GBX1Q14549 363 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 KCNJ11Q14654 390 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 ARHGAP19Q14CB8 494 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 SPINK14Q6IE38 97 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 SPPL2CQ8IUH8 684 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 CRLF3Q8IUI8 442 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 CEP97Q8IW35 865 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 OR51Q1Q8NH59 317 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 ZNF480Q8WV37 535 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 GPR137Q96N19 417 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 PRAP1Q96NZ9 151 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 UTP23Q9BRU9 249 aaKnown RBP24.49■■□□□ 1.51
PVT1-219ENST00000523427 DESI2Q9BSY9 194 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 IL22Q9GZX6 179 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 SYBUQ9NX95 663 aa24.49■■□□□ 1.51
PVT1-219ENST00000523427 C19orf25Q9UFG5 118 aaPredicted RBP24.49■■□□□ 1.51
PVT1-219ENST00000523427 CLDN14O95500 239 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 F7P08709 466 aaPredicted RBP24.48■■□□□ 1.51
PVT1-219ENST00000523427 EEF1DP29692 281 aaKnown RBP24.48■■□□□ 1.51
PVT1-219ENST00000523427 ATP5DP30049 168 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 CD96P40200 585 aa24.48■■□□□ 1.51
PVT1-219ENST00000523427 OC90Q02509 493 aaPredicted RBP24.48■■□□□ 1.51
PVT1-219ENST00000523427 FAM53BQ14153 422 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms