RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 MVB12AQ96EY5 273 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 CCDC138Q96M89 665 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 PSMG3-AS1Q96PY0 264 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 MACROD1Q9BQ69 325 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 WDR77Q9BQA1 342 aaPredicted RBP19.67■□□□□ 0.74
SDCBP-209ENST00000522243 TRIM51Q9BSJ1 452 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 NAT9Q9BTE0 207 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 DRC3Q9H069 523 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 PLAC1Q9HBJ0 212 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 LRRC4CQ9HCJ2 640 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 TMEM184CQ9NVA4 438 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 SPENQ96T58 3664 aaKnown RBP19.67■□□□□ 0.74
SDCBP-209ENST00000522243 IDSB3KWA1 339 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 TXNDC9O14530 226 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 KLHL18O94889 574 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 SLC26A3P40879 764 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 RELAQ04206 551 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 NAE1Q13564 534 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 PHKG1Q16816 387 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 TEDDM1Q5T9Z0 273 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 TRMT10BQ6PF06 316 aaKnown RBP19.66■□□□□ 0.74
SDCBP-209ENST00000522243 LINC00696Q6ZRV3 163 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 CREG2Q8IUH2 290 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 PDIK1LQ8N165 341 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 GPATCH11Q8N954 259 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 CNDP1Q96KN2 507 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 PARVBQ9HBI1 364 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 NTNG1Q9Y2I2 539 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 COPG1Q9Y678 874 aaKnown RBP19.66■□□□□ 0.74
SDCBP-209ENST00000522243 ESPL1Q14674 2120 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 RELNP78509 3460 aa19.66■□□□□ 0.74
SDCBP-209ENST00000522243 HECTD1Q9ULT8 2610 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 SCN3AQ9NY46 2000 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 NSG1A0A0A6YYJ2 146 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 FEZF1A0PJY2 475 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 HEXBP07686 556 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 COX6A1P12074 109 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 GP1BBP13224 206 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 CSNK1G2P78368 415 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 DR1Q01658 176 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 PDAP1Q13442 181 aaKnown RBP19.65■□□□□ 0.74
SDCBP-209ENST00000522243 MORF4L2Q15014 288 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 NDUFA9Q16795 377 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 CRB2Q5IJ48 1285 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 HECTD2Q5U5R9 776 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 KIAA0408Q6ZU52 694 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 VN1R4Q7Z5H5 301 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 SHISA5Q8N114 240 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 AMER2Q8N7J2 671 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 OR9A4Q8NGU2 314 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 DNAJB14Q8TBM8 379 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 PPP4R1Q8TF05 950 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 WDR83Q9BRX9 315 aaKnown RBP19.65■□□□□ 0.74
SDCBP-209ENST00000522243 TRIM31Q9BZY9 425 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 MKKSQ9NPJ1 570 aaPredicted RBP19.65■□□□□ 0.74
SDCBP-209ENST00000522243 NOVA2Q9UNW9 492 aaKnown RBP19.65■□□□□ 0.74
SDCBP-209ENST00000522243 PCDHGA10Q9Y5H3 936 aa19.65■□□□□ 0.74
SDCBP-209ENST00000522243 SLC16A5O15375 505 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 TTI1O43156 1089 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 HIST1H2AGP0C0S8 130 aaPredicted RBP19.64■□□□□ 0.73
SDCBP-209ENST00000522243 RNF224P0DH78 156 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 HIST1H2ADP20671 130 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 CXCR2P25025 360 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 AVPR1BP47901 424 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 ITGA8P53708 1063 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 SP140Q13342 867 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 FAM53BQ14153 422 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 HIBCHQ6NVY1 386 aaPredicted RBP19.64■□□□□ 0.73
SDCBP-209ENST00000522243 IGFL2Q6UWQ7 119 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 PRSS41Q7RTY9 318 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 C17orf64Q86WR6 236 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 ANKMY2Q8IV38 441 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 ZC3H7AQ8IWR0 971 aaKnown RBP19.64■□□□□ 0.73
SDCBP-209ENST00000522243 HIST1H2AHQ96KK5 128 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 OLFM1Q99784 485 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 HIST1H2AJQ99878 128 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 H2AFJQ9BTM1 129 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 EPS8L2Q9H6S3 715 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 C14orf105Q9NVL8 296 aa19.64■□□□□ 0.73
SDCBP-209ENST00000522243 LCMT2O60294 686 aaKnown RBP19.63■□□□□ 0.73
SDCBP-209ENST00000522243 JRKO75564 520 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 CBX6O95503 412 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 TSPAN12O95859 305 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 CELA2AP08217 269 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 CDH1P12830 882 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 HRH2P25021 359 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 EFNA3P52797 238 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 IL2P60568 153 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 RPS15AP62244 130 aaKnown RBP19.63■□□□□ 0.73
SDCBP-209ENST00000522243 ZXDCQ2QGD7 858 aaPredicted RBP19.63■□□□□ 0.73
SDCBP-209ENST00000522243 ISLR2Q6UXK2 745 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 SYDE1Q6ZW31 735 aaPredicted RBP19.63■□□□□ 0.73
SDCBP-209ENST00000522243 NDUFAF7Q7L592 441 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 KBTBD2Q8IY47 623 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 CATSPER1Q8NEC5 780 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 ZCCHC10Q8TBK6 192 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 SSC4DQ8WTU2 575 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 PYCR2Q96C36 320 aa19.63■□□□□ 0.73
SDCBP-209ENST00000522243 NAPGQ99747 312 aaPredicted RBP19.63■□□□□ 0.73
SDCBP-209ENST00000522243 TGIF2Q9GZN2 237 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms