RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 PPM1MQ96MI6 270 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 KLHL25Q9H0H3 589 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 FAM86C1Q9NVL1 165 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 POMT2Q9UKY4 750 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 G3BP2Q9UN86 482 aaKnown RBP20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 TMEM131Q92545 1883 aa20.52■□□□□ 0.88
R3HCC1-208ENST00000522012 PCDH15Q96QU1 1955 aa20.52■□□□□ 0.88
R3HCC1-208ENST00000522012 USP34Q70CQ2 3546 aa20.52■□□□□ 0.88
R3HCC1-208ENST00000522012 A0A0J9YY10 115 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 NRP2O60462 931 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 DCTN3O75935 186 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 FKBP9O95302 570 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 ZNF883P0CG24 379 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 NCF2P19878 526 aaPredicted RBP20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 MAGP20916 626 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 SPEM2Q0P670 501 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 NR6A1Q15406 480 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 AMZ1Q400G9 498 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 ACPTQ9BZG2 426 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 PITHD1Q9GZP4 211 aaPredicted RBP20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 ABCG4Q9H172 646 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 DNAAF2Q9NVR5 837 aaKnown RBP20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 TRIM33Q9UPN9 1127 aa20.52■□□□□ 0.87
R3HCC1-208ENST00000522012 IGHV1OR21-1A0A087WYE8 117 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 LY6G6EA0A0G2JKS1 128 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 TRBC2A0A5B9 178 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 HAT1O14929 419 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 B4GAT1O43505 415 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 PVRP15151 417 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 LSSP48449 732 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 PHEXP78562 749 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 ZNF33BQ06732 778 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 GALNTL6Q49A17 601 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 ATP6AP1LQ52LC2 224 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 SPDYAQ5MJ70 313 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 TMEM198Q66K66 360 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 ZNF425Q6IV72 752 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 GUSBP11Q6P575 273 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 FIGLAQ6QHK4 219 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 PRR23CQ6ZRP0 262 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 PAQR7Q86WK9 346 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 TBC1D19Q8N5T2 526 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 GBP7Q8N8V2 638 aaPredicted RBP20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 ZMYND15Q9H091 742 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 NT5DC2Q9H857 520 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 EVA1BQ9NVM1 165 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 NCDNQ9UBB6 729 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 BTBD3Q9Y2F9 522 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 CCL27Q9Y4X3 112 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 PCDHGB2Q9Y5G2 931 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 U3KQA8 63 aa20.51■□□□□ 0.87
R3HCC1-208ENST00000522012 TP53BP1Q12888 1972 aaPredicted RBP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 ARHGEF17Q96PE2 2063 aaPredicted RBP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 SERTM1A2A2V5 107 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 ANKDD1BA6NHY2 528 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 MAGEB17A8MXT2 336 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 CAPN5O15484 640 aaPredicted RBP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 TNFSF14O43557 240 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 LCMT2O60294 686 aaKnown RBP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 CCDC22O60826 627 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 LBPP18428 481 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 CDH3P22223 829 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 CSTF3Q12996 717 aaKnown RBP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 NR1D2Q14995 579 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 C10orf62Q5T681 223 aaPredicted RBP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 METTL21CQ5VZV1 264 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 ANKRD53Q8N9V6 530 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 TGM7Q96PF1 710 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 LRRC37BQ96QE4 947 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 EPB41L1Q9H4G0 881 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 SLC12A4Q9UP95 1085 aa20.5■□□□□ 0.87
R3HCC1-208ENST00000522012 FCHO1O14526 889 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 DUX1O43812 170 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 SH3BGRLO75368 114 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 PNLIPP16233 465 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 BCL6P41182 706 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 PIK3CBP42338 1070 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 RPS13P62277 151 aaKnown RBP20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 CYP4F2P78329 520 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 DAB2P98082 770 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 NAA25Q14CX7 972 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 AP5B1Q2VPB7 878 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 INAVAQ3KP66 663 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 FCRL6Q6DN72 434 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 FAM92BQ6ZTR7 304 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 ZUFSPQ96AP4 578 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 ZDHHC12Q96GR4 267 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 MARK4Q96L34 752 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 PPP3R2Q96LZ3 170 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 CATSPER2Q96P56 530 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 NMUR2Q9GZQ4 415 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 RHBGQ9H310 441 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 SEMA6CQ9H3T2 930 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 BRF2Q9HAW0 419 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 DMRT3Q9NQL9 472 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 SEMA4GQ9NTN9 838 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 ANKMY1Q9P2S6 941 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 ADGRE2Q9UHX3 823 aa20.49■□□□□ 0.87
R3HCC1-208ENST00000522012 TSC22D4Q9Y3Q8 395 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms