RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 SHC2P98077 582 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 IRF8Q02556 426 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TRAF3Q13114 568 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TARDBPQ13148 414 aaKnown RBP eCLIP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CHIT1Q13231 466 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CAMK2BQ13554 666 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PWP1Q13610 501 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 MPP2Q14168 576 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 MAP7Q14244 749 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 C16orf72Q14CZ0 275 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 FAM214AQ32MH5 1076 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CFAP157Q5JU67 520 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TMEM164Q5U3C3 297 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 HHATQ5VTY9 493 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 GARNL3Q5VVW2 1013 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 GRHL2Q6ISB3 625 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 FBXO42Q6P3S6 717 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TMIGD1Q6UXZ0 262 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 FRMD7Q6ZUT3 714 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 DGLUCYQ7Z3D6 616 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 GOLGA7Q7Z5G4 137 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 B3GNT8Q7Z7M8 397 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TAX1BP1Q86VP1 789 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 C10orf107Q8IVU9 208 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 SPNS2Q8IVW8 549 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TEX9Q8N6V9 391 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TRPV3Q8NET8 790 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 EXT2Q93063 718 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 ESAMQ96AP7 390 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PYCR2Q96C36 320 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 ZNF501Q96CX3 271 aaPredicted RBP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TM4SF19Q96DZ7 209 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PHF21BQ96EK2 531 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 MVB12AQ96EY5 273 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 METTL2AQ96IZ6 378 aaKnown RBP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 LRFN5Q96NI6 719 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PRAP1Q96NZ9 151 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TAAR9Q96RI9 348 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 NRTNQ99748 197 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CCT7Q99832 543 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 DPH2Q9BQC3 489 aaPredicted RBP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 NLNQ9BYT8 704 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 SLC29A3Q9BZD2 475 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 DRC3Q9H069 523 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 GSTO2Q9H4Y5 243 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 SYNDIG1Q9H7V2 258 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 POLR1BQ9H9Y6 1135 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CLK4Q9HAZ1 481 aaKnown RBP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 EML4Q9HC35 981 aaKnown RBP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 ZBTB26Q9HCK0 441 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 SLC6A20Q9NP91 592 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 FGF21Q9NSA1 209 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 GEMIN8Q9NWZ8 242 aaKnown RBP6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 TMEM9Q9P0T7 183 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 DKK4Q9UBT3 224 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CIDEBQ9UHD4 219 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 ZFP69BQ9UJL9 534 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 HAO1Q9UJM8 370 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 SERTAD3Q9UJW9 196 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 RARRES3Q9UL19 164 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 SRPK3Q9UPE1 567 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 MSRB2Q9Y3D2 182 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 LOXL2Q9Y4K0 774 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 ASB1Q9Y576 335 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCDHB3Q9Y5E6 796 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCDHGA4Q9Y5G9 962 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 CACNA1AO00555 2505 aa6.1□□□□□ -1.43
IGHV4-55-201ENST00000520889 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 E7EQ34 232 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 FOXE1O00358 373 aaPredicted RBP6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 OR7A17O14581 309 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 PLD2O14939 933 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 POLR1CO15160 346 aaPredicted RBP6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 CTSVO60911 334 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 KRT6AP02538 564 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 KRT6BP04259 564 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 SERPINE1P05121 402 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 SERPINA6P08185 405 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 CD63P08962 238 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 SLC35G6P0C7Q6 338 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 JMJD7P0C870 316 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 SPTBP11277 2137 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 FGF3P11487 239 aaPredicted RBP6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 CDH1P12830 882 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 PCSK2P16519 638 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 NR1D1P20393 614 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 KRT6CP48668 564 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 CCNG1P51959 295 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 HK2P52789 917 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 NAGLUP54802 743 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 ITGA1P56199 1179 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 ERVPABLB-1P60509 514 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 SKP1P63208 163 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 PHEXP78562 749 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 TSTA3Q13630 321 aaPredicted RBP6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 FAM53BQ14153 422 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 DOC2AQ14183 400 aa6.09□□□□□ -1.43
IGHV4-55-201ENST00000520889 RCN2Q14257 317 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms