RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TBC1D23Q9NUY8 699 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 PCDHGB5Q9Y5G0 923 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 A0A1W2PRB8 838 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 H3BNH8 94 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 RTCAO00442 366 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 KLK8O60259 260 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 ANGPTL1O95841 491 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 C6orf47O95873 294 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 B3GALT4O96024 378 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 ADRB3P13945 408 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 RANBP1P43487 201 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 HPCAP84074 193 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 ZNF234Q14588 700 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 MEP1AQ16819 746 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 SPATS1Q496A3 300 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 GCNT6Q5T4J0 391 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 PPP2R2DQ66LE6 453 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 HMBOX1Q6NT76 420 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 LRRTM4Q86VH4 590 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 ZNF513Q8N8E2 541 aaPredicted RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 DNAJB8Q8NHS0 232 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 VANGL1Q8TAA9 524 aaPredicted RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 HM13Q8TCT9 377 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 FGF13Q92913 245 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 NEIL2Q969S2 332 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 SLC35A5Q9BS91 424 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 C1QTNF7Q9BXJ2 289 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 XKR8Q9H6D3 395 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 NCKAP1Q9Y2A7 1128 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 A0A1W2PP55 124 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 CACNB4O00305 520 aaPredicted RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 ARNTLO00327 626 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 KDM1AO60341 852 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 CCNDBP1O95273 360 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 SRPRAP08240 638 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 NR2F1P10589 423 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 EN2P19622 333 aaPredicted RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 CD9P21926 228 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 ATP6V1E1P36543 226 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 CDH12P55289 794 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 RFX4Q33E94 735 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 SPIN4Q56A73 249 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.82□□□□□ -0.84
MCF2-209ENST00000520602 ATG9BQ674R7 924 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 GPR153Q6NV75 609 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 VTCN1Q7Z7D3 282 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 TICAM1Q8IUC6 712 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 NPAS3Q8IXF0 933 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 STX19Q8N4C7 294 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 SMYD1Q8NB12 490 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 MAL2Q969L2 176 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 FBXL8Q96CD0 374 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 GPATCH1Q9BRR8 931 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 TRIM39Q9HCM9 518 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 RHBDL2Q9NX52 303 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 CNOT11Q9UKZ1 510 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 ANGPT4Q9Y264 503 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 OR1A2Q9Y585 309 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 ZNF638Q14966 1978 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 FADS2P1A8MWK0 482 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 M0QX08 132 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 TNFRSF11BO00300 401 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 KAT7O95251 611 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 OLFM2O95897 454 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 IDSP22304 550 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 TTKP33981 857 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 TRPC1P48995 793 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 DGKEP52429 567 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 GSTM4Q03013 218 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 PIGFQ07326 219 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 KCNAB2Q13303 367 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 OR2T5Q6IEZ7 315 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 LILRA6Q6PI73 481 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 GALNT13Q8IUC8 556 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 SVOPLQ8N434 492 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 OR2T29Q8NH02 315 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 OR10G6Q8NH81 332 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 HSH2DQ96JZ2 352 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 ZNF583Q96ND8 569 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 FAM120CQ9NX05 1096 aaKnown RBP9.81□□□□□ -0.84
MCF2-209ENST00000520602 FBXL12Q9NXK8 326 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 TTC36A6NLP5 189 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 PFKLP17858 780 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 FMO3P31513 532 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 ERVK-21P61565 698 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 B4GALNT1Q00973 533 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 ALDH6A1Q02252 535 aaKnown RBP9.81□□□□□ -0.84
MCF2-209ENST00000520602 HNRNPA1L2Q32P51 320 aaKnown RBP9.81□□□□□ -0.84
MCF2-209ENST00000520602 TTC29Q8NA56 475 aaPredicted RBP9.81□□□□□ -0.84
MCF2-209ENST00000520602 C1QTNF3Q9BXJ4 246 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 ZNF696Q9H7X3 374 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 USE1Q9NZ43 259 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 PTTG2Q9NZH5 202 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 ABCD2Q9UBJ2 740 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 ACSL6Q9UKU0 697 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 SARDHQ9UL12 918 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 A0A1B0GTW7 788 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 LINC01553A4QN01 128 aa9.81□□□□□ -0.84
MCF2-209ENST00000520602 EIF3FO00303 357 aaPredicted RBP9.81□□□□□ -0.84
MCF2-209ENST00000520602 TFAP2AP05549 437 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms