RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 BBS2Q9BXC9 721 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 KLHL25Q9H0H3 589 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 ABCB10Q9NRK6 738 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 GPC6Q9Y625 555 aaPredicted RBP16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 GFRA2O00451 464 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 LAMP1P11279 417 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 GADD45AP24522 165 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 SLC19A1P41440 591 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 SELENBP1Q13228 472 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 CHIT1Q13231 466 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 COLEC12Q5KU26 742 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 TMEM150AQ86TG1 271 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 LYSMD2Q8IV50 215 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 KIAA1958Q8N8K9 716 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 SH3KBP1Q96B97 665 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 C19orf43Q9BQ61 176 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 VN1R3Q9BXE9 311 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 ELAC1Q9H777 363 aaKnown RBP16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 ANKMY1Q9P2S6 941 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 ZNF229Q9UJW7 825 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 ALPK3Q96L96 1907 aa16.02■□□□□ 0.15
PCDHGA11-202ENST00000518882 AIREO43918 545 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 SOCS5O75159 536 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 UPK1BO75841 260 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 MYO1DO94832 1006 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 RRM2P31350 389 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 GRK5P34947 590 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 CLK1P49759 484 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 SRSF11Q05519 484 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 TMEM53Q6P2H8 277 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 SERPINA13PQ6UXR4 307 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 SAPCD2Q86UD0 394 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 CPA6Q8N4T0 437 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 OR8J2Q8NGG1 315 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 MTERF1Q99551 399 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 C2orf49Q9BVC5 232 aaPredicted RBP16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 GABARAPL3Q9BY60 117 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 CHST8Q9H2A9 424 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 TPT1P8Q9HAU6 139 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 TMPRSS11EQ9UL52 423 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 LAMA2P24043 3122 aaKnown RBP16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 OBSL1O75147 1896 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 METTL15A6NJ78 407 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 TBKBP1A7MCY6 615 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 ACPPP15309 386 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 LHCGRP22888 699 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 PFN3P60673 137 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 PTSQ03393 145 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 ABRQ12979 859 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 ZNF404Q494X3 552 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 TTC23LQ6PF05 361 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 ARMC8Q8IUR7 673 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 HTRA1Q92743 480 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 EPYCQ99645 322 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 CLSTN3Q9BQT9 956 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 RNF167Q9H6Y7 350 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 DNAJC11Q9NVH1 559 aa16.01■□□□□ 0.15
PCDHGA11-202ENST00000518882 PABPN1LA6NDY0 278 aaKnown RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 GCM2O75603 506 aaPredicted RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 RFPL2O75678 378 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 C8GP07360 202 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 HIST1H2AGP0C0S8 130 aaPredicted RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 JUPP14923 745 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 TNFRSF1BP20333 461 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 HIST1H2ADP20671 130 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 HNMTP50135 292 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 DDX39BQ13838 428 aaKnown RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 VEZF1Q14119 521 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 TAF12Q16514 161 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 SOWAHCQ53LP3 525 aaPredicted RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 LRRC73Q5JTD7 316 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 ADNP2Q6IQ32 1131 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 RETSATQ6NUM9 610 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 NEK10Q6ZWH5 1172 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 RNF180Q86T96 592 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 P3H2Q8IVL5 708 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 TCAIMQ8N3R3 496 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 HIST1H2AHQ96KK5 128 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 HIST1H2AJQ99878 128 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 H2AFJQ9BTM1 129 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 FAM120CQ9NX05 1096 aaKnown RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 PSORS1C1Q9UIG5 152 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 LRFN2Q9ULH4 789 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 FZD4Q9ULV1 537 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 PCDHB11Q9Y5F2 797 aa16■□□□□ 0.15
PCDHGA11-202ENST00000518882 HELZP42694 1942 aaKnown RBP16■□□□□ 0.15
PCDHGA11-202ENST00000518882 A0A1W2PQ67 120 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 DSCR3O14972 297 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 TBX1O43435 398 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 NUAK1O60285 661 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 SH3BGRLO75368 114 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 MTX2O75431 263 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 NTRK1P04629 796 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 GSTT2P0CG29 244 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 GSTT2BP0CG30 244 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 SEPHS1P49903 392 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 TPTEP56180 551 aa15.99■□□□□ 0.15
PCDHGA11-202ENST00000518882 GAB1Q13480 694 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms