RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TXNDC9O14530 226 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 DSCR3O14972 297 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 KATNA1O75449 491 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 SUPT3HO75486 399 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 RAB40ALP0C0E4 278 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 COL6A2P12110 1019 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 GRK3P35626 688 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 GDF5P43026 501 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 GLRBP48167 497 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 EMP3P54852 163 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 DCDP81605 110 aaKnown RBP21■□□□□ 0.95
VEGFA-217ENST00000518538 ERCC6LQ2NKX8 1250 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 FAM198BQ6UWH4 519 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 TIFABQ6ZNK6 161 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 TTLL10Q6ZVT0 673 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 PLD6Q8N2A8 252 aaKnown RBP21■□□□□ 0.95
VEGFA-217ENST00000518538 TSNARE1Q96NA8 513 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 C17orf62Q9BQA9 187 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 PPCSQ9HAB8 311 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 MRPS18BQ9Y676 258 aaKnown RBP21■□□□□ 0.95
VEGFA-217ENST00000518538 ZFHX4Q86UP3 3567 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 PTPRQQ9UMZ3 2332 aa21■□□□□ 0.95
VEGFA-217ENST00000518538 UBXN8O00124 270 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 SHBGP04278 402 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 ALAS2P22557 587 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 PTPN4P29074 926 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 RPS15P62841 145 aaKnown RBP20.99■□□□□ 0.95
VEGFA-217ENST00000518538 MC1RQ01726 317 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 CATSPEREQ5SY80 951 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 AENQ8WTP8 325 aaKnown RBP20.99■□□□□ 0.95
VEGFA-217ENST00000518538 CABS1Q96KC9 395 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 RUFY1Q96T51 708 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 SARGQ9BW04 601 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 NLNQ9BYT8 704 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 PELI2Q9HAT8 420 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 RUVBL1Q9Y265 456 aaKnown RBP20.99■□□□□ 0.95
VEGFA-217ENST00000518538 CFAP47Q6ZTR5 3102 aa20.99■□□□□ 0.95
VEGFA-217ENST00000518538 TRBC2A0A5B9 178 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 FEZF1A0PJY2 475 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 C9J4A7 227 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 RFPL1O75677 317 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 STK16O75716 305 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 CAPN1P07384 714 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 MTHFD2P13995 350 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 BCL6P41182 706 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 HSPA7P48741 367 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 CDC16Q13042 620 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 COL9A2Q14055 689 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-217ENST00000518538 NCF4Q15080 339 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 TSNAXIP1Q2TAA8 658 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 MUM1Q2TAK8 710 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 NKAIN1Q4KMZ8 207 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 CRTC2Q53ET0 693 aaPredicted RBP20.98■□□□□ 0.95
VEGFA-217ENST00000518538 TECRLQ5HYJ1 363 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 EMBQ6PCB8 327 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 NXPE4Q6UWF7 544 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 VN1R4Q7Z5H5 301 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 TMPRSS11BQ86T26 416 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 UBTD2Q8WUN7 234 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 ESAMQ96AP7 390 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 C10orf90Q96M02 699 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 CAPS2Q9BXY5 557 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 ACTL8Q9H568 366 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 DNAJC11Q9NVH1 559 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 GPRC5BQ9NZH0 403 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 NDOR1Q9UHB4 597 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 FARSAQ9Y285 508 aaKnown RBP20.98■□□□□ 0.95
VEGFA-217ENST00000518538 LAMA5O15230 3695 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 CACNA1BQ00975 2339 aa20.98■□□□□ 0.95
VEGFA-217ENST00000518538 P2RX6O15547 441 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 LCMT2O60294 686 aaKnown RBP20.97■□□□□ 0.95
VEGFA-217ENST00000518538 MED26O95402 600 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 ONECUT2O95948 504 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 RECKO95980 971 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 RBP1P09455 135 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 GNAZP19086 355 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 HSD17B3P37058 310 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 REEP5Q00765 189 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 MEF2AQ02078 507 aaPredicted RBP20.97■□□□□ 0.95
VEGFA-217ENST00000518538 HKDC1Q2TB90 917 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 FBXO48Q5FWF7 155 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 GARNL3Q5VVW2 1013 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 LRRC70Q7Z2Q7 622 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 TBC1D19Q8N5T2 526 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 ENDOVQ8N8Q3 282 aaKnown RBP20.97■□□□□ 0.95
VEGFA-217ENST00000518538 MFSD9Q8NBP5 474 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 AIF1LQ9BQI0 150 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 CD244Q9BZW8 370 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 ZNF358Q9NW07 568 aa20.97■□□□□ 0.95
VEGFA-217ENST00000518538 IFT80Q9P2H3 777 aaPredicted RBP20.97■□□□□ 0.95
VEGFA-217ENST00000518538 MAP2K7O14733 419 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 NKX2-8O15522 239 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 CCNT2O60583 730 aaKnown RBP20.96■□□□□ 0.95
VEGFA-217ENST00000518538 CREG1O75629 220 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 PIM1P11309 404 aaPredicted RBP20.96■□□□□ 0.95
VEGFA-217ENST00000518538 ITGAXP20702 1163 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 RHDQ02161 417 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 CDC20Q12834 499 aa20.96■□□□□ 0.95
VEGFA-217ENST00000518538 PDK4Q16654 411 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms