RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 CPLX4Q7Z7G2 160 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 RPAINQ86UA6 219 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 MKXQ8IYA7 352 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 CEP57L1Q8IYX8 460 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 RPLP0P6Q8NHW5 317 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 FLVCR1-AS1Q8TAF5 88 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 KCNE4Q8WWG9 221 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 FAM104AQ969W3 186 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 PGAM5Q96HS1 289 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 SFXN2Q96NB2 322 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 TLE6Q9H808 572 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 PAG1Q9NWQ8 432 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 PKD2L2Q9NZM6 624 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 Q9UF83 564 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 CORO1CQ9ULV4 474 aaPredicted RBP0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 MGAT4AQ9UM21 535 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 ZNF175Q9Y473 711 aa0.92□□□□□ -2.26
RNU6-561P-201ENST00000516222 NPHP3Q7Z494 1330 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 TRBV5-5A0A0J9YX44 114 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 hCG_38984A0A1B0GV85 526 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 RNF103O00237 685 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 IPO8O15397 1037 aaKnown RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 CYTIPO60759 359 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 RHBDL1O75783 438 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 DDX58O95786 925 aaKnown RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 IRF2P14316 349 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 MATR3P43243 847 aaKnown RBP eCLIP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 STX17P56962 302 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 TMF1P82094 1093 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 SRSF9Q13242 221 aaKnown RBP eCLIP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 CYLC2Q14093 348 aaPredicted RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 GCKRQ14397 625 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 OPCMLQ14982 345 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 TMEM266Q2M3C6 531 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 VWA2Q5GFL6 755 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 ZNF776Q68DI1 518 aaPredicted RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 ZNF600Q6ZNG1 722 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 ARHGAP22Q7Z5H3 698 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 TMEM173Q86WV6 379 aaPredicted RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 SLC22A15Q8IZD6 547 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 THAP8Q8NA92 274 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 BEST4Q8NFU0 473 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 OR4K1Q8NGD4 311 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 OR9Q2Q8NGE9 314 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 SETD7Q8WTS6 366 aaKnown RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 FAM122AQ96E09 287 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 CMTM3Q96MX0 182 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 ANKRD27Q96NW4 1050 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 CDCA3Q99618 268 aaPredicted RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 CHRDL1Q9BU40 450 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 PRRG4Q9BZD6 226 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 SPATC1LQ9H0A9 340 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 DIAPH3Q9NSV4 1193 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 HACD3Q9P035 362 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 ABCG2Q9UNQ0 655 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 GPR52Q9Y2T5 361 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 MRPS18CQ9Y3D5 142 aaKnown RBP0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 ARID1AO14497 2285 aa0.91□□□□□ -2.26
RNU6-561P-201ENST00000516222 SPRR5A0A1B0GTR4 108 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 BCLAF3A2AJT9 711 aaKnown RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 LIPT2A6NK58 231 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 TCP10L2B9ZVM9 353 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZNF749O43361 778 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 TNFSF12O43508 249 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 CA11O75493 328 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 IGLV1-47P01700 117 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 GIG44P09565 113 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 RPA1P27694 616 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 RPL9P32969 192 aaKnown RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 VAMP7P51809 220 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 IST1P53990 364 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 CRMP1Q14194 572 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 C16orf72Q14CZ0 275 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 MLF2Q15773 248 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 KCTD19Q17RG1 926 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 MCMDC2Q4G0Z9 681 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 FAM106AQ4KMX7 169 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 C10orf62Q5T681 223 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 DHRS7BQ6IAN0 325 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR4A47Q6IF82 309 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 KLHL35Q6PF15 583 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 LDB1Q86U70 411 aaPredicted RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 LRP11Q86VZ4 500 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 MMD2Q8IY49 270 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 UBQLNLQ8IYU4 475 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 C1orf131Q8NDD1 294 aaKnown RBP0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 ADAMTS16Q8TE57 1224 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 PIGBQ92521 554 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 PIK3R3Q92569 461 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 SLAMF9Q96A28 289 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZUFSPQ96AP4 578 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 SCLT1Q96NL6 688 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 BTBD9Q96Q07 612 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 IL12RB2Q99665 862 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 MXD3Q9BW11 206 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 HES7Q9BYE0 225 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 HRH4Q9H3N8 390 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 JMJD4Q9H9V9 463 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 KCNK13Q9HB14 408 aa0.9□□□□□ -2.27
RNU6-561P-201ENST00000516222 PATZ1Q9HBE1 687 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms