RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ABCE1P61221 599 aaKnown RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 RPS15AP62244 130 aaKnown RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 SH3BP2P78314 561 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 BST1Q10588 318 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 SLBPQ14493 270 aaKnown RBP eCLIP20.12■□□□□ 0.81
LSM6-207ENST00000515311 ZC3H12BQ5HYM0 836 aaKnown RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 TMTC4Q5T4D3 741 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 LETMD1Q6P1Q0 360 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 MILR1Q7Z6M3 343 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 SYVN1Q86TM6 617 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 KRT78Q8N1N4 520 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 CKAP2Q8WWK9 683 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 ADAMTS14Q8WXS8 1223 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 ZNF75CPQ92670 426 aaPredicted RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 UBE2E3Q969T4 207 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 MAGEB18Q96M61 343 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 CDK15Q96Q40 435 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 ZFYVE21Q9BQ24 234 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 STRADBQ9C0K7 418 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 MID1IP1Q9NPA3 183 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 ZNF225Q9UK10 706 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 RNF11Q9Y3C5 154 aa20.12■□□□□ 0.81
LSM6-207ENST00000515311 MDC1Q14676 2089 aaKnown RBP20.12■□□□□ 0.81
LSM6-207ENST00000515311 SPEGQ15772 3267 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 KCNE1BA0A087WTH5 132 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 A0A1B0GTL3 188 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 NRP2O60462 931 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 PRAMEF10O60809 474 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 CTSVO60911 334 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 SNNO75324 88 aaPredicted RBP20.11■□□□□ 0.81
LSM6-207ENST00000515311 CSO75390 466 aaKnown RBP20.11■□□□□ 0.81
LSM6-207ENST00000515311 HSPA4LO95757 839 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 ENO1P06733 434 aaKnown RBP20.11■□□□□ 0.81
LSM6-207ENST00000515311 CHRNGP07510 517 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 ARRB2P32121 409 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 CCR10P46092 362 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 SLC1A6P48664 564 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 MEF2AQ02078 507 aaPredicted RBP20.11■□□□□ 0.81
LSM6-207ENST00000515311 HIST2H2ACQ16777 129 aaPredicted RBP20.11■□□□□ 0.81
LSM6-207ENST00000515311 HIST2H2AA3Q6FI13 130 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 TMIGD1Q6UXZ0 262 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 RGS9BPQ6ZS82 235 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 TMPRSS12Q86WS5 348 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 DNAJC22Q8N4W6 341 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 AGBL5Q8NDL9 886 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 RCBTB1Q8NDN9 531 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 LRRC8CQ8TDW0 803 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 THAP11Q96EK4 314 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 LIN37Q96GY3 246 aaPredicted RBP20.11■□□□□ 0.81
LSM6-207ENST00000515311 SEC16BQ96JE7 1060 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 SLC29A3Q9BZD2 475 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 SPNS1Q9H2V7 528 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 FAM60AQ9NP50 221 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 TSC22D4Q9Y3Q8 395 aa20.11■□□□□ 0.81
LSM6-207ENST00000515311 DCDC2BA2VCK2 349 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 H0YIV9 168 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 HGFP14210 728 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 GSTM2P28161 218 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 CSTF2P33240 577 aaKnown RBP eCLIP20.1■□□□□ 0.81
LSM6-207ENST00000515311 AHRP35869 848 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 C16orf72Q14CZ0 275 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 C10orf62Q5T681 223 aaPredicted RBP20.1■□□□□ 0.81
LSM6-207ENST00000515311 MED27Q6P2C8 311 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 FBXO42Q6P3S6 717 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 CUZD1Q86UP6 607 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 MYLK4Q86YV6 388 aaPredicted RBP20.1■□□□□ 0.81
LSM6-207ENST00000515311 HOMEZQ8IX15 550 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 LAS2Q8IYD9 372 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 CHCHD4Q8N4Q1 142 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 ZNF740Q8NDX6 193 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 REPS1Q96D71 796 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 THAP1Q9NVV9 213 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 AKAP7Q9P0M2 348 aaPredicted RBP20.1■□□□□ 0.81
LSM6-207ENST00000515311 HAO1Q9UJM8 370 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.1■□□□□ 0.81
LSM6-207ENST00000515311 PCDHGA11Q9Y5H2 935 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 PTPRBP23467 1997 aa20.1■□□□□ 0.81
LSM6-207ENST00000515311 ITM2AO43736 263 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 OR1F1O43749 312 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 OR4F21O95013 312 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 FGF4P08620 206 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 SERPINB1P30740 379 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 MDH1P40925 334 aaKnown RBP20.09■□□□□ 0.81
LSM6-207ENST00000515311 BCL6P41182 706 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 SCTRP47872 440 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 GABRA4P48169 554 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 PUM1Q14671 1186 aaKnown RBP eCLIP20.09■□□□□ 0.81
LSM6-207ENST00000515311 KIRREL3Q8IZU9 778 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 MFSD9Q8NBP5 474 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 TTLQ8NG68 377 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 OR2A5Q96R48 311 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 SIDT1Q9NXL6 827 aaKnown RBP20.09■□□□□ 0.81
LSM6-207ENST00000515311 ZNF490Q9ULM2 529 aaPredicted RBP20.09■□□□□ 0.81
LSM6-207ENST00000515311 PLCL2Q9UPR0 1127 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 PCDHGA4Q9Y5G9 962 aa20.09■□□□□ 0.81
LSM6-207ENST00000515311 FEZF1A0PJY2 475 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 SRPX2O60687 465 aaPredicted RBP20.08■□□□□ 0.81
LSM6-207ENST00000515311 LYPLA1O75608 230 aaPredicted RBP20.08■□□□□ 0.81
LSM6-207ENST00000515311 CAPN1P07384 714 aa20.08■□□□□ 0.81
LSM6-207ENST00000515311 CLDN6P56747 220 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms