RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 KCTD6Q8NC69 237 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 OR10Q1Q8NGQ4 319 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 SLCO2A1Q92959 643 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 FAF2Q96CS3 445 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 FAM96AQ9H5X1 160 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 SYNPO2LQ9H987 977 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 DDX56Q9NY93 547 aaKnown RBP8.6□□□□□ -1.03
NUP54-211ENST00000512151 JRKLQ9Y4A0 524 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 FAM215AQ9Y5M1 114 aa8.6□□□□□ -1.03
NUP54-211ENST00000512151 LOC285095A0A1B0GVY8 99 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 LRRD1A4D1F6 860 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 MIF4GDA9UHW6 222 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 TFECO14948 347 aaPredicted RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 HS6ST1O60243 411 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 SLC25A12O75746 678 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 GLI4P10075 376 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 PKLRP30613 574 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 CXCR5P32302 372 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 CDKN2BP42772 138 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 ZFP36L2P47974 494 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 RWDD2BP57060 319 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 AP2B1P63010 937 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 SNRPNP63162 240 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 XIAPP98170 497 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 OC90Q02509 493 aaPredicted RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 PPIDQ08752 370 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 PDK2Q15119 407 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 RPS6KA1Q15418 735 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 SLC14A2Q15849 920 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 MEP1AQ16819 746 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 PLAG1Q6DJT9 500 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 RTL6Q6ICC9 239 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 GLT6D1Q7Z4J2 308 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 TAX1BP1Q86VP1 789 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 RCOR2Q8IZ40 523 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 FAM98AQ8NCA5 519 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 OR52N2Q8NGI0 321 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 OR5M3Q8NGP4 307 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 KIF18AQ8NI77 898 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 BLOC1S5Q8TDH9 187 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 FAM222BQ8WU58 562 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 TMEM158Q8WZ71 300 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 IL17FQ96PD4 163 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 RNF157Q96PX1 679 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 SRPK1Q96SB4 655 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 TTYH2Q9BSA4 534 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 YIPF2Q9BWQ6 316 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 SLC6A16Q9GZN6 736 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 TRABDQ9H4I3 376 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 ASB8Q9H765 288 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 KCNK13Q9HB14 408 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 GLOD4Q9HC38 313 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 PNPLA3Q9NST1 481 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.59□□□□□ -1.03
NUP54-211ENST00000512151 ZC3H7BQ9UGR2 993 aaKnown RBP8.59□□□□□ -1.03
NUP54-211ENST00000512151 CIDEBQ9UHD4 219 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 FKBPLQ9UIM3 349 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 ASF1AQ9Y294 204 aa8.59□□□□□ -1.03
NUP54-211ENST00000512151 hCG_1818297A0A087WSY0 165 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 OR2W5A6NFC9 320 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 ARHGEF9O43307 516 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 SRP72O76094 671 aaKnown RBP8.58□□□□□ -1.04
NUP54-211ENST00000512151 ATP1B2P14415 290 aaPredicted RBP8.58□□□□□ -1.04
NUP54-211ENST00000512151 MX2P20592 715 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 UQCRC1P31930 480 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 WNT3AP56704 352 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 RPA4Q13156 261 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 PRTGQ2VWP7 1150 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 GXYLT1Q4G148 440 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 ZC3H12BQ5HYM0 836 aaKnown RBP8.58□□□□□ -1.04
NUP54-211ENST00000512151 CCDC70Q6NSX1 233 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 NPNTQ6UXI9 565 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 MTERF4Q7Z6M4 381 aaKnown RBP8.58□□□□□ -1.04
NUP54-211ENST00000512151 ULK2Q8IYT8 1036 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 TBC1D21Q8IYX1 336 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 UBL4BQ8N7F7 174 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 PLD5Q8N7P1 536 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 OR5M9Q8NGP3 310 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
NUP54-211ENST00000512151 DCUN1D1Q96GG9 259 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 MS4A14Q96JA4 679 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 ZNF670Q9BS34 389 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 BDH2Q9BUT1 245 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 HEMGNQ9BXL5 484 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 TGIF2Q9GZN2 237 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 C14orf105Q9NVL8 296 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 SNX12Q9UMY4 172 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.58□□□□□ -1.04
NUP54-211ENST00000512151 PKP3Q9Y446 797 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 ARL5AQ9Y689 179 aa8.58□□□□□ -1.04
NUP54-211ENST00000512151 A0A0J9YVX5 310 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 AGAP14A8MT82 685 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 ZNF487B1APH4 448 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 NPIPA2E9PIF3 369 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 NPIPA3F8WFD2 350 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 SYT5O00445 386 aa8.57□□□□□ -1.04
NUP54-211ENST00000512151 STX7O15400 261 aaKnown RBP8.57□□□□□ -1.04
NUP54-211ENST00000512151 SUN1O94901 812 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms