RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 HIST3H2AQ7L7L0 130 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 MCEMP1Q8IX19 187 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 TRPC4APQ8TEL6 797 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 SDR42E1Q8WUS8 393 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 EXOC4Q96A65 974 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 BICD1Q96G01 975 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 CCDC34Q96HJ3 373 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 ADGRG7Q96K78 797 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 LURAP1Q96LR2 239 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 MBOAT7Q96N66 472 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF385AQ96PM9 386 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 FNBP1Q96RU3 617 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 CMKLR1Q99788 373 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 SRSF8Q9BRL6 282 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 MAK16Q9BXY0 300 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 ADNPQ9H2P0 1102 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 PIH1D3Q9NQM4 214 aaKnown RBP3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 TMEM30AQ9NV96 361 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 TBC1D13Q9NVG8 400 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 DNAJB4Q9UDY4 337 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 SIX4Q9UIU6 781 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 CMAHPQ9Y471 501 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 LOXL2Q9Y4K0 774 aa3.42□□□□□ -1.86
TOPBP1-208ENST00000511439 PDCD11Q14690 1871 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 NIPBLQ6KC79 2804 aaeCLIP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MAGEA13PA6NCF6 341 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 HEPACAM2A8MVW5 462 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF587BE7ETH6 402 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 KCNN4O15554 427 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 AHCYL1O43865 530 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 LDB3O75112 727 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 GPC4O75487 556 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TPPPO94811 219 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 CD1EP15812 388 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 S1PR1P21453 382 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 UGT1A1P22309 533 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 PON1P27169 355 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MARK3P27448 753 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 GCH1P30793 250 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MATKP42679 507 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 UQCRFS1P47985 274 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 CLDN6P56747 220 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TAS2R38P59533 333 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 ZNF33AQ06730 810 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 FCHO2Q0JRZ9 810 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TFCP2Q12800 502 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MAD2L1Q13257 205 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 SNTA1Q13424 505 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 IZUMO4Q1ZYL8 232 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 CCDC158Q5M9N0 1113 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 C12orf60Q5U649 245 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 NSUN5P2Q63ZY6 315 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 METTL7BQ6UX53 244 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 SDCCAG8Q86SQ7 713 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 SATL1Q86VE3 508 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 FAM228AQ86W67 206 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 GPR65Q8IYL9 337 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 C1orf87Q8N0U7 546 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 C17orf53Q8N3J3 647 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 OR1J2Q8NGS2 313 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 CCDC26Q8TAB7 109 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 OLIG1Q8TAK6 271 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 LMO3Q8TAP4 145 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 HMGCLL1Q8TB92 370 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 URGCPQ8TCY9 931 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 RLN3Q8WXF3 142 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 SGF29Q96ES7 293 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 SAT2Q96F10 170 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 CALML4Q96GE6 196 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TAAR1Q96RJ0 339 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 CCNL2Q96S94 520 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MTERF1Q99551 399 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 NUDT16L1Q9BRJ7 211 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TMEM175Q9BSA9 504 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 PIGMQ9H3S5 423 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 DDX31Q9H8H2 851 aaKnown RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TRPV4Q9HBA0 871 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 EPB41L5Q9HCM4 733 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 GTSE1Q9NYZ3 720 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 ERAP1Q9NZ08 941 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 PCDHGB4Q9UN71 923 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 TMEM5Q9Y2B1 443 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 PCDHGB1Q9Y5G3 927 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MN1Q10571 1320 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 MED13Q9UHV7 2174 aa3.41□□□□□ -1.86
TOPBP1-208ENST00000511439 VWA8A3KMH1 1905 aa3.4□□□□□ -1.86
TOPBP1-208ENST00000511439 CABIN1Q9Y6J0 2220 aa3.4□□□□□ -1.86
TOPBP1-208ENST00000511439 NBASA2RRP1 2371 aa3.4□□□□□ -1.86
TOPBP1-208ENST00000511439 ABCA7Q8IZY2 2146 aa3.4□□□□□ -1.86
TOPBP1-208ENST00000511439 STAB1Q9NY15 2570 aa3.4□□□□□ -1.86
TOPBP1-208ENST00000511439 IGKV6D-41A0A0C4DH26 115 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 HEATR9A2RTY3 570 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 FAM90A26D6RGX4 464 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 ZNF197O14709 1029 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 SMAD9O15198 467 aaKnown RBP3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 OGG1O15527 345 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 PGM3O95394 542 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 SELLP14151 372 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 CD99P14209 185 aa3.4□□□□□ -1.87
TOPBP1-208ENST00000511439 MCCP23508 829 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms