RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 BCL2L14Q9BZR8 327 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 BRINP2Q9C0B6 783 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 EIF5A2Q9GZV4 153 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 ARL6Q9H0F7 186 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LMAN2LQ9H0V9 348 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PPIL3Q9H2H8 161 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 SEMA6CQ9H3T2 930 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ACTR8Q9H981 624 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ALG13Q9NP73 1137 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 AGPAT3Q9NRZ7 376 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TMEM100Q9NV29 134 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SEC14L3Q9UDX4 400 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 NAGPAQ9UK23 515 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ASB3Q9Y575 518 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PTCH2Q9Y6C5 1203 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SNCAIPQ9Y6H5 919 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RPS6KL1Q9Y6S9 549 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 hCG_1807616A0A1W2PRN6 198 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ELOVL7A1L3X0 281 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TMEM221A6NGB7 291 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 K7ERQ8 282 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GPR25O00155 361 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 KHNYNO15037 678 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 CLIC2O15247 247 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 P2RX6O15547 441 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 HCRTR2O43614 444 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CNTN5O94779 1100 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MATN4O95460 622 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LARGE1O95461 756 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GLP2RO95838 553 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 C4BPAP04003 597 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC10A3P09131 477 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PRR29P0C7W0 189 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CPN1P15169 458 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC5A2P31639 672 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MPIP34949 423 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ECI1P42126 302 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CHRNA4P43681 627 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 HOXA1P49639 335 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 HTD2P86397 168 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CTBP1Q13363 440 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TNFAIP1Q13829 316 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GCKRQ14397 625 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GPR68Q15743 365 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TOMM34Q15785 309 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 CYP2A13Q16696 494 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PXDC1Q5TGL8 231 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ALG1LQ6GMV1 187 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TMEM214Q6NUQ4 689 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 EFCAB12Q6NXP0 572 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MOXD1Q6UVY6 613 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 Q6ZNX1 250 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LINGO2Q7L985 606 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ZBTB46Q86UZ6 589 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TRABD2AQ86V40 505 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 C12orf40Q86WS4 652 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ZNF34Q8IZ26 560 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PRR22Q8IZ63 422 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LRRC71Q8N4P6 559 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CPSF7Q8N684 471 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 NFATC2IPQ8NCF5 419 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PSD4Q8NDX1 1056 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PIGXQ8TBF5 258 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FBXO25Q8TCJ0 367 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CSGALNACT1Q8TDX6 532 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CPNE4Q96A23 557 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 XAGE2Q96GT9 111 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 HSFY1Q96LI6 401 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PNMA5Q96PV4 448 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MTERF1Q99551 399 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 MRPL4Q9BYD3 311 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 IL22Q9GZX6 179 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC25A31Q9H0C2 315 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ATG5Q9H1Y0 275 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 NLE1Q9NVX2 485 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 ZNF230Q9UIE0 474 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 FZD4Q9ULV1 537 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ERVW-1Q9UQF0 538 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ZNF609O15014 1411 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 LTBP1Q14766 1721 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SYNDIG1LA6NDD5 238 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 URADA6NGE7 173 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TTLL8A6PVC2 850 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TAAR5O14804 337 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RNF13O43567 381 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 NCR1O76036 304 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RGS11O94810 467 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CHRNA1P02708 482 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FABP1P07148 127 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ADH1AP07327 375 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ADRB1P08588 477 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC2A4P14672 509 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CD1EP15812 388 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SDHBP21912 280 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DGKAP23743 735 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CCKARP32238 428 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CCNFP41002 786 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 MTHFRP42898 656 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DNASE1L1P49184 302 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms