RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 CRCPO75575 148 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 C1QAP02745 245 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 LTA4HP09960 611 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CYP4B1P13584 511 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 AOC1P19801 751 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 IL10P22301 178 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 MAPK9P45984 424 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 VBP1P61758 197 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CDK3Q00526 305 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 POU4F1Q01851 419 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 VAC14Q08AM6 782 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CDKN3Q16667 212 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 COLEC12Q5KU26 742 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CERS6Q6ZMG9 384 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 Q6ZSR6 202 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TDRPQ86YL5 185 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 VRK3Q8IV63 474 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SLC38A6Q8IZM9 456 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TRAM1L1Q8N609 369 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 KDM1BQ8NB78 822 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CCL4L1Q8NHW4 92 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CCDC120Q96HB5 630 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SPACA7Q96KW9 195 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 NRTNQ99748 197 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 HGH1Q9BTY7 390 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ILKAPQ9H0C8 392 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CDH19Q9H159 772 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SMOC1Q9H4F8 434 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 OLAHQ9NV23 265 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 GIMAP2Q9UG22 337 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CDYLQ9Y232 598 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ASF1AQ9Y294 204 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 A8MUA0 341 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 BIRC5O15392 142 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 PAPLNO95428 1278 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 HTR1BP28222 390 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 AKT2P31751 481 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 IGFALSP35858 605 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ACTR1BP42025 376 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 GDF5P43026 501 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ACTR1AP61163 376 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SNRPD2P62316 118 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 B4GALNT1Q00973 533 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TBCCQ15814 346 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 GPR33Q49SQ1 333 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SGO1Q5FBB7 561 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 HENMT1Q5T8I9 393 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ANKRD26P1Q6NSI1 321 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TMEM207Q6UWW9 146 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 KIAA0408Q6ZU52 694 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CHSY3Q70JA7 882 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 DHFR2Q86XF0 187 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 GALNT13Q8IUC8 556 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 PLPP6Q8IY26 295 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 MIER2Q8N344 545 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ZBTB2Q8N680 514 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 NATD1Q8N6N6 113 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 OR13H1Q8NG92 308 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 OR7A2PQ8NGA2 310 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 OR2T34Q8NGX1 318 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 VOPP1Q96AW1 172 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 PDXPQ96GD0 296 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ZCCHC2Q9C0B9 1178 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 DPEP2Q9H4A9 486 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ALG2Q9H553 416 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ASXL3Q9C0F0 2248 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 A0A1W2PQ72 361 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 RGSL1A5PLK6 1076 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TNFRSF21O75509 655 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ESR1P03372 595 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 JUNP05412 331 aaKnown RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 THEGLP0DJG4 465 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ATP6V1B2P21281 511 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CCR7P32248 378 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 BDKRB1P46663 353 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 CLCNKAP51800 687 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TAB1Q15750 504 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TTLL9Q3SXZ7 439 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 TECPR1Q7Z6L1 1165 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SPEM1Q8N4L4 309 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 SH3KBP1Q96B97 665 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ITCHQ96J02 903 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 BIRC8Q96P09 236 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 HBEGFQ99075 208 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ZNF717Q9BY31 904 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ARL15Q9NXU5 204 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 BAG5Q9UL15 447 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ERVK-11Q9UQG0 969 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ERGIC3Q9Y282 383 aa8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 PCYT1BQ9Y5K3 369 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 MAGED1Q9Y5V3 778 aaPredicted RBP8.41□□□□□ -1.06
LIMCH1-209ENST00000509277 ARHGEF17Q96PE2 2063 aaPredicted RBP8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 OR52A4PA6NMU1 304 aa8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 H3BM21 787 aa8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 H3BMM5 538 aa8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 GRID2O43424 1007 aa8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 SNAP29O95721 258 aa8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 HSMCR30P0CW71 290 aa8.4□□□□□ -1.06
LIMCH1-209ENST00000509277 CNTFP26441 200 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms