RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 EDEM2Q9BV94 578 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FICDQ9BVA6 458 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 COL25A1Q9BXS0 654 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CPEB1Q9BZB8 566 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 LHPPQ9H008 270 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GAL3ST2Q9H3Q3 398 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FAM83DQ9H4H8 585 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 POLD4Q9HCU8 107 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SYBUQ9NX95 663 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RBAKQ9NYW8 714 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PRSS50Q9UI38 385 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GPR160Q9UJ42 338 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ADAMTS5Q9UNA0 930 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 AP3M1Q9Y2T2 418 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NFASCO94856 1347 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PHLPP2Q6ZVD8 1323 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NPIPA2E9PIF3 369 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MSI1O43347 362 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 AKR7A2O43488 359 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PPP1R11O60927 126 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MED24O75448 989 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RPP14O95059 124 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 OLFM2O95897 454 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NR3C2P08235 984 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FAM228BP0C875 321 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CETPP11597 493 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PSMC3P17980 439 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 POLR2EP19388 210 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 S1PR1P21453 382 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ACHEP22303 614 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 OTX2P32243 289 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CCR1P32246 355 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GMPSP49915 693 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 AGFG1P52594 562 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 VSNL1P62760 191 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RELQ04864 619 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CDK5R2Q13319 367 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 KRT81Q14533 505 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CHRNA6Q15825 494 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FAM98BQ52LJ0 330 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC35F1Q5T1Q4 408 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GPR157Q5UAW9 335 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC8EQ6NSJ5 796 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TPGS1Q6ZTW0 290 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ARHGAP22Q7Z5H3 698 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC51AQ86UW1 340 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 HIPK1Q86Z02 1210 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC7A5P1Q8MH63 180 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FBXW8Q8N3Y1 598 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TAS1R2Q8TE23 839 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CPA5Q8WXQ8 436 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF512Q96ME7 567 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MCMBPQ9BTE3 642 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 PI4K2AQ9BTU6 479 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 WNT8AQ9H1J5 351 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 KCNK13Q9HB14 408 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 IL1RL2Q9HB29 575 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ADARB2Q9NS39 739 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CNOT8Q9UFF9 292 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 A4GNTQ9UNA3 340 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CNTN6Q9UQ52 1028 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NOX1Q9Y5S8 564 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FAM230AA0A1W2PPH8 454 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ASB14A6NK59 587 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ANXA2P2A6NMY6 339 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RNF212BA8MTL3 300 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TCP10L2B9ZVM9 353 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 I6L893 689 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SMIM22K7EJ46 135 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 AKAP3O75969 853 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 LIPFP07098 398 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TXNP10599 105 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC18A3Q16572 532 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 TCTN1Q2MV58 587 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SGSM1Q2NKQ1 1148 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CERCAMQ5T4B2 595 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SERPINA9Q86WD7 417 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 CILP2Q8IUL8 1156 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 VSTM4Q8IW00 320 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ZNF687Q8N1G0 1237 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 LRRC17Q8N6Y2 441 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 INO80EQ8NBZ0 244 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 OR13C3Q8NGS6 347 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ZFP28Q8NHY6 868 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 KCNG3Q8TAE7 436 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ISL2Q96A47 359 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MIB2Q96AX9 1013 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NMD3Q96D46 503 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RBM41Q96IZ5 413 aaKnown RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 FANCD2OSQ96PS1 177 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 VPS35Q96QK1 796 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ROPN1BQ9BZX4 212 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 RNF208Q9H0X6 261 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 ADAMTS10Q9H324 1103 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 MCCC2Q9HCC0 563 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GPRC5DQ9NZD1 345 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 NKX1-2Q9UD57 310 aaPredicted RBP3.8□□□□□ -1.8
NEDD4-209ENST00000508871 KCNN3Q9UGI6 736 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 GGA2Q9UJY4 613 aa3.8□□□□□ -1.8
NEDD4-209ENST00000508871 SLC22A14Q9Y267 594 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms