RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 MYL6BP14649 208 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 ELAVL4P26378 380 aaKnown RBP5.92□□□□□ -1.46
CHD1-205ENST00000508756 CDC25CP30307 473 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 OR3A2P47893 321 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 ZNF273Q14593 569 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 LBHQ53QV2 105 aaPredicted RBP5.92□□□□□ -1.46
CHD1-205ENST00000508756 CES4AQ5XG92 561 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 KIF6Q6ZMV9 814 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 SLC24A5Q71RS6 500 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 FCRLAQ7L513 359 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 CCDC186Q7Z3E2 898 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 KIF18AQ8NI77 898 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 EGLN3Q9H6Z9 239 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 NUDT4Q9NZJ9 180 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 PRDM4Q9UKN5 801 aa5.92□□□□□ -1.46
CHD1-205ENST00000508756 MPTX1A8MV57 137 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 STAG3L1P0CL83 205 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 SP100P23497 879 aaPredicted RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 CALCOCO2Q13137 446 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 TAB1Q15750 504 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 SNAI3Q3KNW1 292 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 ERN2Q76MJ5 926 aaKnown RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 RCOR2Q8IZ40 523 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 CCAR2Q8N163 923 aaKnown RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 FAM89BQ8N5H3 189 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 ANKRD9Q96BM1 317 aaPredicted RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 OMA1Q96E52 524 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 RADILQ96JH8 1075 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 CDCA3Q99618 268 aaPredicted RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 TDRD1Q9BXT4 1180 aaKnown RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 SDCBP2Q9H190 292 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 SNX25Q9H3E2 840 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 MED20Q9H944 212 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 RAVER2Q9HCJ3 691 aaKnown RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 TEX10Q9NXF1 929 aaPredicted RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 CFDP1Q9UEE9 299 aaPredicted RBP5.91□□□□□ -1.46
CHD1-205ENST00000508756 HEG1Q9ULI3 1381 aa5.91□□□□□ -1.46
CHD1-205ENST00000508756 ERI2A8K979 691 aaKnown RBP5.9□□□□□ -1.46
CHD1-205ENST00000508756 C17orf105B2RV13 164 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 PI4K2BG5E9Z4 385 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 SOCS3O14543 225 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 DKC1O60832 514 aaKnown RBP eCLIP5.9□□□□□ -1.46
CHD1-205ENST00000508756 F3P13726 295 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 PTAFRP25105 342 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 CETN2P41208 172 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 CACNG1Q06432 222 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 SGCGQ13326 291 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 NFATC2Q13469 925 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 TRA2AQ13595 282 aaKnown RBP eCLIP5.9□□□□□ -1.46
CHD1-205ENST00000508756 FASTKD3Q14CZ7 662 aaKnown RBP5.9□□□□□ -1.46
CHD1-205ENST00000508756 MOGAT2Q3SYC2 334 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 TAF1BQ53T94 588 aaPredicted RBP5.9□□□□□ -1.46
CHD1-205ENST00000508756 CYB5D1Q6P9G0 228 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 IQUBQ8NA54 791 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 AQP11Q8NBQ7 271 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 NUP37Q8NFH4 326 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 C11orf45Q8TAV5 145 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 SEPT1Q8WYJ6 367 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 NSMAFQ92636 917 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 PGM2Q96G03 612 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 BTBD9Q96Q07 612 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 UBXN6Q9BZV1 441 aa5.9□□□□□ -1.46
CHD1-205ENST00000508756 RIMS4Q9H426 269 aaPredicted RBP5.9□□□□□ -1.46
CHD1-205ENST00000508756 PHPT1Q9NRX4 125 aaPredicted RBP5.9□□□□□ -1.46
CHD1-205ENST00000508756 MYH14Q7Z406 1995 aaKnown RBP5.89□□□□□ -1.47
CHD1-205ENST00000508756 MTMR11A4FU01 709 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 IDH3BO43837 385 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 FDPSP14324 419 aaKnown RBP5.89□□□□□ -1.47
CHD1-205ENST00000508756 NPY4RP50391 375 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 ZNF41P51814 821 aaPredicted RBP5.89□□□□□ -1.47
CHD1-205ENST00000508756 DCDC1P59894 354 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 SUSD1Q6UWL2 747 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 FRRS1Q6ZNA5 592 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 ANKRD33Q7Z3H0 272 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 ADCK2Q7Z695 626 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 GPC2Q8N158 579 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 PRSS33Q8NF86 280 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 GTF3AQ92664 365 aaKnown RBP5.89□□□□□ -1.47
CHD1-205ENST00000508756 BAG1Q99933 345 aaPredicted RBP5.89□□□□□ -1.47
CHD1-205ENST00000508756 LRRC61Q9BV99 259 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 HOXD1Q9GZZ0 328 aa5.89□□□□□ -1.47
CHD1-205ENST00000508756 ELF5Q9UKW6 265 aaPredicted RBP5.89□□□□□ -1.47
CHD1-205ENST00000508756 A0A1W2PPW3 197 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 CCDC188H7C350 402 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 PI15O43692 258 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 SFTPDP35247 375 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 IRX4P78413 519 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 C6orf136Q5SQH8 315 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 NRARPQ7Z6K4 114 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 ABI3BPQ7Z7G0 1075 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 APCDD1Q8J025 514 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 CCDC63Q8NA47 563 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 Q8NBF4 154 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 CNRIP1Q96F85 164 aaPredicted RBP5.88□□□□□ -1.47
CHD1-205ENST00000508756 PRICKLE1Q96MT3 831 aaPredicted RBP5.88□□□□□ -1.47
CHD1-205ENST00000508756 EGFL8Q99944 293 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 CHCHD3Q9NX63 227 aaKnown RBP5.88□□□□□ -1.47
CHD1-205ENST00000508756 PKD2L2Q9NZM6 624 aa5.88□□□□□ -1.47
CHD1-205ENST00000508756 SELENOKQ9Y6D0 94 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms