RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ZC3H7AQ8IWR0 971 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TCAIMQ8N3R3 496 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 LILRA3Q8N6C8 439 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ARL10Q8N8L6 244 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MINDY2Q8NBR6 621 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PIK3C3Q8NEB9 887 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 FBXO30Q8TB52 745 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 BTN2A2Q8WVV5 523 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 OR8D1Q8WZ84 308 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ELMO1Q92556 727 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 FGF14Q92915 247 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 USP7Q93009 1102 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 GLYATL1Q969I3 302 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MRPL38Q96DV4 380 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ITCHQ96J02 903 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 OR52E6Q96RD3 313 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 NODALQ96S42 347 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MYADMQ96S97 322 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MBOAT4Q96T53 435 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 FAM129BQ96TA1 746 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 WDR12Q9GZL7 423 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 NAA50Q9GZZ1 169 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TRIT1Q9H3H1 467 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 KAT8Q9H7Z6 458 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 GIN1Q9NXP7 522 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ERGIC3Q9Y282 383 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TPRKBQ9Y3C4 175 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 USP34Q70CQ2 3546 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 KIF26AQ9ULI4 1882 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TRBV5-3A0A0A0MS03 114 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MANBAO00462 879 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 KPNA4O00629 521 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 WNT9AO14904 365 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MAGEB3O15480 346 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ZSCAN9O15535 394 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TSPAN6O43657 245 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 SOD1P00441 154 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PCNAP12004 261 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PRPH2P23942 346 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 SOX11P35716 441 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ABHD18Q0P651 414 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ABRQ12979 859 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 KCNAB2Q13303 367 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PON2Q15165 354 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CRTC3Q6UUV7 619 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PARM1Q6UWI2 310 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TRIM74Q86UV6 250 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 MMAAQ8IVH4 418 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 LIX1Q8N485 282 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 RASGEF1AQ8N9B8 481 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 HCAR2Q8TDS4 363 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 FBLIM1Q8WUP2 373 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ASB11Q8WXH4 323 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 FAM120BQ96EK7 910 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 PYURFQ96I23 114 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 CDCA3Q99618 268 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 RPP25Q9BUL9 199 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 GABARAPL1Q9H0R8 117 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 HMG20AQ9NP66 347 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 OBP2AQ9NY56 170 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 NFKBIL1Q9UBC1 381 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 WARS2Q9UGM6 360 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ENPP5Q9UJA9 477 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF490Q9ULM2 529 aaPredicted RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 SAMD4AQ9UPU9 718 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 TMED5Q9Y3A6 229 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 NEUROG3Q9Y4Z2 214 aa10.67□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF99A8MXY4 864 aaPredicted RBP10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 NPIPB8E9PQR5 432 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 FFAR3O14843 346 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 SLC22A1O15245 554 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 GPR42O15529 346 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 NUAK1O60285 661 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 E2F6O75461 281 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 SULT1C4O75897 302 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 PRKD3O94806 890 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 FKBP9O95302 570 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 CLDN9O95484 217 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 EPHX1P07099 455 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 ADRB3P13945 408 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 CD247P20963 164 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 IGFBP4P22692 258 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 DCTP40126 519 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 ZNF33BQ06732 778 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 CD47Q08722 323 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 NR1D2Q14995 579 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 USP39Q53GS9 565 aaKnown RBP10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 EGFLAMQ63HQ2 1017 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 ANKRD54Q6NXT1 300 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 SHQ1Q6PI26 577 aaKnown RBP10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 ENPP6Q6UWR7 440 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 CHST15Q7LFX5 561 aaPredicted RBP10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 PGBD3Q8N328 593 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 TMIEQ8NEW7 156 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 BPIFB6Q8NFQ5 453 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 TANKQ92844 425 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 FOXJ1Q92949 421 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 PYCR2Q96C36 320 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 DTD2Q96FN9 168 aa10.66□□□□□ -0.7
SH3RF1-203ENST00000508685 VMP1Q96GC9 406 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms