RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 STX7O15400 261 aaKnown RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 GRID2O43424 1007 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TLX3O43711 291 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 LIASO43766 372 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 KRT86O43790 486 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 CEP104O60308 925 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 KATNA1O75449 491 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 ANXA9O76027 345 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 CDK14O94921 469 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TNFSF15O95150 251 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 ONECUT2O95948 504 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 IFNB1P01574 187 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 EPOP01588 193 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 GP1BAP07359 652 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PRR35P0CG20 571 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PRSS56P0CW18 603 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 ENPP1P22413 925 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TEAD1P28347 426 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PBLDP30039 288 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 ADRA1AP35348 466 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 ACTN2P35609 894 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 MAPK9P45984 424 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 KCNJ1P48048 391 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 GEMP55040 296 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 B4GALNT1Q00973 533 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 CFHR1Q03591 330 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TMEM115Q12893 351 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 KLF1Q13351 362 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 MSLNQ13421 630 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 NFATC2Q13469 925 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 BIRC2Q13490 618 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PRPSAP1Q14558 356 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PDCD1Q15116 288 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SEPT7Q16181 437 aaKnown RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 PARP6Q2NL67 630 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 COL28A1Q2UY09 1125 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 CCDC38Q502W7 563 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 C3orf38Q5JPI3 329 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 ZNF569Q5MCW4 686 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 CERCAMQ5T4B2 595 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SUMO4Q6EEV6 95 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 IYDQ6PHW0 289 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TMEM220Q6QAJ8 160 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 RBM44Q6ZP01 1051 aaKnown RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 DET1Q7L5Y6 550 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 GLT6D1Q7Z4J2 308 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SLC13A5Q86YT5 568 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 ZNF547Q8IVP9 402 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 NAGSQ8N159 534 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TXLNBQ8N3L3 684 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TRAM1L1Q8N609 369 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 RASGEF1AQ8N9B8 481 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 GLIS1Q8NBF1 620 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TOR1AIP2Q8NFQ8 470 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 OR13C4Q8NGS5 318 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 ZNF398Q8TD17 642 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 JPH3Q8WXH2 748 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 NAT6Q93015 286 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 GLYATL1Q969I3 302 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SGF29Q96ES7 293 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 MS4A14Q96JA4 679 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SPATA13Q96N96 652 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 LYSMD1Q96S90 227 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TBL1YQ9BQ87 522 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 NUDT22Q9BRQ3 303 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 FSD1LQ9BXM9 530 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 GSDMCQ9BYG8 508 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SEMA4CQ9C0C4 833 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 OSGEPL1Q9H4B0 414 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 EPB41L5Q9HCM4 733 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 NRIP3Q9NQ35 241 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 KLC4Q9NSK0 619 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 TRNAU1APQ9NX07 287 aaKnown RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 TRMT1Q9NXH9 659 aaKnown RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 TMEM9Q9P0T7 183 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 SATB2Q9UPW6 733 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PPP2R2CQ9Y2T4 447 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 PKP3Q9Y446 797 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 URB1O60287 2271 aaKnown RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 ANKRD11Q6UB99 2663 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 CACNA1BQ00975 2339 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 COL5A1P20908 1838 aaPredicted RBP4.44□□□□□ -1.7
NUP54-206ENST00000508465 CHD6Q8TD26 2715 aa4.44□□□□□ -1.7
NUP54-206ENST00000508465 OR2AG2A6NM03 316 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 C2orf81A6NN90 581 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 KMOO15229 486 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 TP73O15350 636 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 POP7O75817 140 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 SCGB1D2O95969 90 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 POLBP06746 335 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CCDC175P0C221 793 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 CCL4P13236 92 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 MTHFD2P13995 350 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 ZNF7P17097 686 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 HLA-DPA1P20036 260 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 LPOP22079 712 aaPredicted RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 RBMS1P29558 406 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 RPL22P35268 128 aaKnown RBP4.43□□□□□ -1.7
NUP54-206ENST00000508465 HMGCLP35914 325 aa4.43□□□□□ -1.7
NUP54-206ENST00000508465 ETV5P41161 510 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms