RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CDY1Q9Y6F8 540 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 CPDO75976 1380 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 QRICH2Q9H0J4 1663 aa7.24□□□□□ -1.25
PDGFRA-206ENST00000508170 MAP3K15Q6ZN16 1313 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 NSD3Q9BZ95 1437 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ATRNL1Q5VV63 1379 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 A0A0A6YYK5 440 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 A0A1W2PRB8 838 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 FUOMA2VDF0 154 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ERVV-1B6SEH8 477 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PPP6CO00743 305 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 KLF11O14901 512 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 FCER2P06734 321 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MAPTP10636 758 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PIM1P11309 404 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PFKFB1P16118 471 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 RAB9AP51151 201 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CLCN3P51790 818 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MVDP53602 400 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACSM2AQ08AH3 577 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ILKQ13418 452 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PTPRCAPQ14761 206 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACSM2BQ68CK6 577 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ANKS6Q68DC2 871 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SYT10Q6XYQ8 523 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SEM1Q6ZVN7 128 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 IQCKQ8N0W5 287 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 OR5D13Q8NGL4 314 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ADAMTS16Q8TE57 1224 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 HTR3CQ8WXA8 447 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ATL1Q8WXF7 558 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ARHGEF26Q96DR7 871 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SMOQ99835 787 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MRPL13Q9BYD1 178 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SLC6A17Q9H1V8 727 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 OR2AG1Q9H205 316 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ZNF768Q9H5H4 540 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 FOLH1BQ9HBA9 442 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CHST11Q9NPF2 352 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SLC6A13Q9NSD5 602 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MED17Q9NVC6 651 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MIS18AQ9NYP9 233 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PLK2Q9NYY3 685 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CLEC2DQ9UHP7 191 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 NAGPAQ9UK23 515 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 EXO1Q9UQ84 846 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CAMSAP1Q5T5Y3 1602 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 USP32Q8NFA0 1604 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ABCC3O15438 1527 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 YEATS2Q9ULM3 1422 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ELP1O95163 1332 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SHPRHQ149N8 1683 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 FAM149AA5PLN7 773 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 DPPA5A6NC42 116 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 FBLL1A6NHQ2 334 aaKnown RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 M0QYG6 137 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 AIM2O14862 343 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 KDELR3O43731 214 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 UPK3AO75631 287 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 LRIG2O94898 1065 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 NKX2-2O95096 273 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PLEKP08567 350 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ANXA4P09525 319 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CPA3P15088 417 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 FOSL2P15408 326 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 DDX6P26196 483 aaKnown RBP eCLIP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 GIFP27352 417 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 GCKP35557 465 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MAGEA9P43362 315 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ARRB1P49407 418 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACTBP60709 375 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACTA2P62736 377 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACTG1P63261 375 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACTG2P63267 376 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACTC1P68032 377 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ACTA1P68133 377 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 MXRA7P84157 204 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 TNP2Q05952 138 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 NAE1Q13564 534 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CRB2Q5IJ48 1285 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CXorf66Q5JRM2 361 aaPredicted RBP7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ZSCAN25Q6NSZ9 544 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 TRPM8Q7Z2W7 1104 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 LIMS2Q7Z4I7 341 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ADGRD2Q7Z7M1 963 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 CATSPERDQ86XM0 798 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PDZD8Q8NEN9 1154 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SLCO4A1Q96BD0 722 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 LRRC3BQ96PB8 259 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 TAAR6Q96RI8 345 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 STRADBQ9C0K7 418 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 LHX5Q9H2C1 402 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 SLCO5A1Q9H2Y9 848 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 TREX1Q9NSU2 369 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 PARPBPQ9NWS1 579 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 GPR132Q9UNW8 380 aa7.23□□□□□ -1.25
PDGFRA-206ENST00000508170 ABCC4O15439 1325 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms