RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ILKAPQ9H0C8 392 aaPredicted RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 FAM60AQ9NP50 221 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 PDP2Q9P2J9 529 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 MARCOQ9UEW3 520 aaPredicted RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 ADAM21Q9UKJ8 722 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 ZNF490Q9ULM2 529 aaPredicted RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 SNX7Q9UNH6 387 aa13.61□□□□□ -0.23
RNF4-208ENST00000507247 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.61□□□□□ -0.23
RNF4-208ENST00000507247 IGHV5-10-1A0A0J9YXX1 117 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 TRBC2A0A5B9 178 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 SLC30A4O14863 429 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 AZIN1O14977 448 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 RASSF9O75901 435 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 SNUPNO95149 360 aaKnown RBP13.6□□□□□ -0.23
RNF4-208ENST00000507247 ENO1P06733 434 aaKnown RBP13.6□□□□□ -0.23
RNF4-208ENST00000507247 FGF4P08620 206 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 THRAP10827 490 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 CSRP1P21291 193 aaKnown RBP13.6□□□□□ -0.23
RNF4-208ENST00000507247 HMOX2P30519 316 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 BCL6P41182 706 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 SEPHS1P49903 392 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 RPL14P50914 215 aaKnown RBP13.6□□□□□ -0.23
RNF4-208ENST00000507247 PDX1P52945 283 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 CLDN6P56747 220 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 ILKQ13418 452 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 LAPTM5Q13571 262 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 NAA25Q14CX7 972 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 ZRSR2Q15696 482 aaKnown RBP13.6□□□□□ -0.23
RNF4-208ENST00000507247 CLPPQ16740 277 aaPredicted RBP13.6□□□□□ -0.23
RNF4-208ENST00000507247 UGT3A2Q3SY77 523 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 RNF44Q7L0R7 432 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 SLCO6A1Q86UG4 719 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 LAS2Q8IYD9 372 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 LRRC34Q8IZ02 419 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 ANKRD53Q8N9V6 530 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 WDR20Q8TBZ3 569 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 ZUFSPQ96AP4 578 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 CCDC74BQ96LY2 380 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 FCRL4Q96PJ5 515 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 DPYSL5Q9BPU6 564 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 SLC29A3Q9BZD2 475 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 FGFR1OP2Q9NVK5 253 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 PILRAQ9UKJ1 303 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 TRAF6Q9Y4K3 522 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
RNF4-208ENST00000507247 SPAARA0A1B0GVQ0 90 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 MED19A0JLT2 244 aaPredicted RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 H0YIV9 168 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 MANBAO00462 879 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 HCRTR1O43613 425 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 ZBTB11O95625 1053 aaPredicted RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 VIMP08670 466 aaKnown RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 KITP10721 976 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 UROSP10746 265 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 EZRP15311 586 aaKnown RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 CXCR2P25025 360 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 SCTRP47872 440 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 SEC24CP53992 1094 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 INSM1Q01101 510 aaPredicted RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 CYP4F3Q08477 520 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 RBBP5Q15291 538 aaKnown RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 DEFB110Q30KQ9 67 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 PAGE2BQ5JRK9 111 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 CGB2Q6NT52 195 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 MED27Q6P2C8 311 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 FBXO42Q6P3S6 717 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 TMIGD1Q6UXZ0 262 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 ARHGAP22Q7Z5H3 698 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 VN1R5Q7Z5H4 357 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 B3GNT8Q7Z7M8 397 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■■ 69.6
RNF4-208ENST00000507247 CLYBLQ8N0X4 340 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 CARFQ8N187 725 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 KRT78Q8N1N4 520 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 RCBTB1Q8NDN9 531 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 OR7G3Q8NG95 312 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 WDR48Q8TAF3 677 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 METTL6Q8TCB7 284 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 KLHL6Q8WZ60 621 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 SLC41A2Q96JW4 573 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 MAGEB10Q96LZ2 347 aaPredicted RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 SARGQ9BW04 601 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 TUBB1Q9H4B7 451 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 ZNF768Q9H5H4 540 aaKnown RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 NT5DC2Q9H857 520 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 FARSBQ9NSD9 589 aaKnown RBP13.59□□□□□ -0.23
RNF4-208ENST00000507247 DLL3Q9NYJ7 618 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 BTRCQ9Y297 605 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 DNAJC15Q9Y5T4 150 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 PTGDR2Q9Y5Y4 395 aa13.59□□□□□ -0.23
RNF4-208ENST00000507247 A0A0J9YVX5 310 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 TOX3O15405 576 aaPredicted RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 OR1F1O43749 312 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 SKAP2O75563 359 aaPredicted RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 CRCPO75575 148 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 DKK1O94907 266 aa13.58□□□□□ -0.24
RNF4-208ENST00000507247 JUNP05412 331 aaKnown RBP13.58□□□□□ -0.24
RNF4-208ENST00000507247 ANKRD34CP0C6C1 535 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms