RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 RHEBL1Q8TAI7 183 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 TTC9Q92623 222 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 ISL2Q96A47 359 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 PTERQ96BW5 349 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 TSNARE1Q96NA8 513 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 OR4K3Q96R72 315 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 CAPS2Q9BXY5 557 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 ALG9Q9H6U8 611 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 PELI2Q9HAT8 420 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 STARD5Q9NSY2 213 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 FETUBQ9UGM5 382 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 NXT1Q9UKK6 140 aaKnown RBP15.93■□□□□ 0.14
SNCA-209ENST00000506244 CDC14AQ9UNH5 594 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 SH2B3Q9UQQ2 575 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 CHD6Q8TD26 2715 aa15.93■□□□□ 0.14
SNCA-209ENST00000506244 HMX2A2RU54 273 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 CDC14CA4D256 554 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 EIF4E1BA6NMX2 242 aaKnown RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 SUPT3HB4E1H0 165 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 SUPT3HO75486 399 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 WDR47O94967 919 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 SLU7O95391 586 aaKnown RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 ALDOAP04075 364 aaKnown RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 SLC35G6P0C7Q6 338 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 SLC6A12P48065 614 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 CSRP3P50461 194 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 ERV3-1Q14264 604 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 TMPRSS11BQ86T26 416 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 RAB43Q86YS6 212 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 GSPT2Q8IYD1 628 aaKnown RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 CENPLQ8N0S6 344 aaPredicted RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 CAMKVQ8NCB2 501 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 UHMK1Q8TAS1 419 aaKnown RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 KCTD4Q8WVF5 259 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 THAP4Q8WY91 577 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 EXT2Q93063 718 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 NEIL2Q969S2 332 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 MTBPQ96DY7 904 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 AIF1LQ9BQI0 150 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 CCDC77Q9BR77 488 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 WDR54Q9H977 334 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 IGSF5Q9NSI5 407 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 GPRC5BQ9NZH0 403 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 RUVBL1Q9Y265 456 aaKnown RBP15.92■□□□□ 0.14
SNCA-209ENST00000506244 SLC22A14Q9Y267 594 aa15.92■□□□□ 0.14
SNCA-209ENST00000506244 TRBC2A0A5B9 178 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 TK2O00142 265 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 KLHL2O95198 593 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 ONECUT2O95948 504 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 ALBP02768 609 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 CAPN1P07384 714 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 SNRPAP09012 282 aaKnown RBP15.91■□□□□ 0.14
SNCA-209ENST00000506244 FAM153BP0C7A2 387 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 GNAZP19086 355 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 CXCR2P25025 360 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 GGT5P36269 586 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 FOLR3P41439 243 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 MAGEA12P43365 314 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 CCR10P46092 362 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 RPS18P62269 152 aaKnown RBP15.91■□□□□ 0.14
SNCA-209ENST00000506244 CDC16Q13042 620 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 SLC9A5Q14940 896 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 ACAP2Q15057 778 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 TBR1Q16650 682 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 ZXDCQ2QGD7 858 aaPredicted RBP15.91■□□□□ 0.14
SNCA-209ENST00000506244 TSNAXIP1Q2TAA8 658 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 FAM153CQ494X1 144 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 MLIPQ5VWP3 458 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 LCN10Q6JVE6 187 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 ISCA2Q86U28 154 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 PLD3Q8IV08 490 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 OR4K1Q8NGD4 311 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 DCAKDQ8WVC6 231 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 EXTL1Q92935 676 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 C10orf90Q96M02 699 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 IP6K3Q96PC2 410 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 RUFY1Q96T51 708 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 SARGQ9BW04 601 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 TXLNGYQ9BZA5 131 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 DRC3Q9H069 523 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 VPS11Q9H270 941 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 PPCSQ9HAB8 311 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 DNAJC11Q9NVH1 559 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 MAN2B2Q9Y2E5 1009 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 SEC16AO15027 2179 aa15.91■□□□□ 0.14
SNCA-209ENST00000506244 FER1L5A0AVI2 2057 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 MDC1Q14676 2089 aaKnown RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 TRIM49D1C9J1S8 452 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 STK16O75716 305 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 SFTPCP11686 197 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 COL6A2P12110 1019 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 FBLP22087 321 aaKnown RBP15.9■□□□□ 0.14
SNCA-209ENST00000506244 BCL6P41182 706 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 SKP1P63208 163 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 REEP5Q00765 189 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 IRF9Q00978 393 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 DLG1Q12959 904 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 FAM53BQ14153 422 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 HKDC1Q2TB90 917 aa15.9■□□□□ 0.14
SNCA-209ENST00000506244 DEFB109BQ30KR1 87 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms