RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SERPINC1P01008 464 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SERPINA6P08185 405 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 HTR1AP08908 422 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MYF5P13349 255 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TPMTP51580 245 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PSMD4P55036 377 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SNAP25P60880 206 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 RPP30P78346 268 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SMAD3P84022 425 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DSC1Q08554 894 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SCRN3Q0VDG4 424 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FAPQ12884 760 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SEMA5AQ13591 1074 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 KRT81Q14533 505 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SIX1Q15475 284 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GUCA2BQ16661 112 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FAM187BQ17R55 369 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZNF674Q2M3X9 581 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC35D3Q5M8T2 416 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CATSPEREQ5SY80 951 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ARHGEF16Q5VV41 709 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 LIPJQ5W064 366 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLFN12LQ6IEE8 588 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TTI2Q6NXR4 508 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZNF529Q6P280 563 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 KCTD1Q719H9 257 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OTOAQ7RTW8 1153 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZNF605Q86T29 641 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 LINC00523Q86TU6 105 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 KRT73Q86Y46 540 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SPPL2CQ8IUH8 684 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CLIP4Q8N3C7 705 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FSTL5Q8N475 847 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TMEM104Q8NE00 496 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR8J2Q8NGG1 315 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 OR8K5Q8NH50 307 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC35B2Q8TB61 432 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PROX1Q92786 737 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ATP2A3Q93084 1043 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 RHBDF1Q96CC6 855 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 RNF125Q96EQ8 232 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DYNLL2Q96FJ2 89 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MRGPRX3Q96LB0 322 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MESP1Q9BRJ9 268 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PELOQ9BRX2 385 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 FOXQ1Q9C009 403 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ZDHHC5Q9C0B5 715 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SPNS1Q9H2V7 528 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SMOC2Q9H3U7 446 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CHST11Q9NPF2 352 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 C19orf12Q9NSK7 152 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 HPF1Q9NWY4 346 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PLA2G2EQ9NZK7 142 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PSME2Q9UL46 239 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 HYOU1Q9Y4L1 999 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PCDHGA5Q9Y5G8 931 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PCDHGA1Q9Y5H4 931 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DNAH12Q6ZR08 3092 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SPENQ96T58 3664 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PTPRJQ12913 1337 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 A0A1W2PN81 502 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TTC26A0AVF1 554 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 HSBP1L1C9JCN9 74 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PYCARD-AS1I3L0S3 204 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CCRL2O00421 344 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ACOT8O14734 319 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC31A2O15432 143 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MRPS14O60783 128 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 HEXIM1O94992 359 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 H6PDO95479 791 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 HLA-DQB1P01920 261 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CRYGCP07315 174 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CTXN2P0C2S0 81 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC2A1P11166 492 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CDH1P12830 882 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CYBAP13498 195 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PKMP14618 531 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PFKFB1P16118 471 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PCMT1P22061 227 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 NR4A1P22736 598 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PTAFRP25105 342 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 TACR3P29371 465 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MAS1LP35410 378 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CHRNA7P36544 502 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GMPRP36959 345 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 IGHMBP2P38935 993 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC15A1P46059 708 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 RFX2P48378 723 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 GALCP54803 685 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CSNK2BP67870 215 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PURAQ00577 322 aaKnown RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 EGR3Q06889 387 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PRKD1Q15139 912 aaPredicted RBP2.2□□□□□ -2.06
NEDD4-205ENST00000506154 MAPK6Q16659 721 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 CHRFAM7AQ494W8 412 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 METTL24Q5JXM2 366 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 ATAT1Q5SQI0 421 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 SLC39A4Q6P5W5 647 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 PRR23BQ6ZRT6 265 aa2.2□□□□□ -2.06
NEDD4-205ENST00000506154 DENND5BQ6ZUT9 1274 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms