RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 FBXO15Q8NCQ5 510 aaPredicted RBP19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 PSMF1Q92530 271 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 LPGAT1Q92604 370 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 THAP11Q96EK4 314 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 UNKQ9C0B0 810 aaKnown RBP19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 CRYL1Q9Y2S2 319 aa19.95■□□□□ 0.78
SQSTM1-210ENST00000506042 A0A0A6YYC8 382 aaPredicted RBP19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 MAGEB16A2A368 324 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 ARHGEF33A8MVX0 844 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 I3L1I5 382 aaPredicted RBP19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 CD46P15529 392 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 TPSB2P20231 275 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 AGAP20933 346 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 CRADDP78560 199 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 FASTKQ14296 549 aaKnown RBP19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 TPSAB1Q15661 275 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 HKDC1Q2TB90 917 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 CTSL3PQ5NE16 218 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 NIPAL1Q6NVV3 410 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 TMEM205Q6UW68 189 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 LMNTD2Q8IXW0 634 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 TBC1D19Q8N5T2 526 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 CAMKVQ8NCB2 501 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 CALML6Q8TD86 181 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 BIRC8Q96P09 236 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 OR2A5Q96R48 311 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 GPAMQ9HCL2 828 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 ABCF3Q9NUQ8 709 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 SOX13Q9UN79 622 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 CAPN6Q9Y6Q1 641 aa19.94■□□□□ 0.78
SQSTM1-210ENST00000506042 ITPR2Q14571 2701 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 A8MUI8 341 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 ITGAMP11215 1152 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 ETS1P14921 441 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 IL10P22301 178 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 MGAT1P26572 445 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 HTR1EP28566 365 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 EEF1DP29692 281 aaKnown RBP19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 GBX1Q14549 363 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 PCOLCEQ15113 449 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 MEP1AQ16819 746 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 ZNF766Q5HY98 468 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 PLAG1Q6DJT9 500 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 ZNF425Q6IV72 752 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 UGT3A1Q6NUS8 523 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 CPEB2Q7Z5Q1 589 aaKnown RBP19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 SLC5A8Q8N695 610 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 AMER3Q8N944 861 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 ITLN2Q8WWU7 325 aaPredicted RBP19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 CCDC120Q96HB5 630 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 TAAR6Q96RI8 345 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 UTP23Q9BRU9 249 aaKnown RBP19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 KCNK13Q9HB14 408 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 ANKHQ9HCJ1 492 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 CCDC177Q9NQR7 707 aaPredicted RBP19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 TMEM184CQ9NVA4 438 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 GUCA1BQ9UMX6 200 aa19.93■□□□□ 0.78
SQSTM1-210ENST00000506042 EIF3FO00303 357 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 SLC19A2O60779 497 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 NSA2O95478 260 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 SLC16A8O95907 504 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 MPC1LP0DKB6 136 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 CCND1P24385 295 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 ACTN3Q08043 901 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 ZNF630Q2M218 657 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 NEPROQ6NW34 567 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 ZC3H7AQ8IWR0 971 aaKnown RBP19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 DTWD1Q8N5C7 304 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 FAM136AQ96C01 138 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 MFSD3Q96ES6 412 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 PKP4Q99569 1192 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 DESI2Q9BSY9 194 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 SYBUQ9NX95 663 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 STOX2Q9P2F5 926 aaPredicted RBP19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 CENPEQ02224 2701 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 CNTRLQ7Z7A1 2325 aa19.92■□□□□ 0.78
SQSTM1-210ENST00000506042 SVILO95425 2214 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 CPAMD8Q8IZJ3 1885 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 MED26O95402 600 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 SLC35G6P0C7Q6 338 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 RIPPLY3P57055 190 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 ALDH6A1Q02252 535 aaKnown RBP19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 ACSBG2Q5FVE4 666 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 CILP2Q8IUL8 1156 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 REXO1L1PQ8IX06 675 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 GPATCH11Q8N954 259 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 THAP3Q8WTV1 239 aaPredicted RBP19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 KCNJ9Q92806 393 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 IMMP1LQ96LU5 166 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 LPAR4Q99677 370 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 SH3BGRL2Q9UJC5 107 aa19.91■□□□□ 0.78
SQSTM1-210ENST00000506042 E7ENX8 843 aa19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 F10P00742 488 aa19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 SSTR2P30874 369 aa19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 RGS4P49798 205 aa19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 TAP2Q03519 686 aa19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 SRSF11Q05519 484 aaKnown RBP19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 ACER2Q5QJU3 275 aa19.9■□□□□ 0.78
SQSTM1-210ENST00000506042 ZNF470Q6ECI4 717 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms